PDB entry 3dr1

View 3dr1 on RCSB PDB site
Description: side-chain fluorine atoms of non-steroidal vitamin d3 analogs stabilize helix 12 of vitamin d receptor
Deposited on 2008-07-10, released 2009-06-16
The last revision was dated 2021-03-03, with a file datestamp of 2021-02-26.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Vitamin D3 receptor A
    Species: Danio rerio [TaxId:7955]
    Gene: vdra, nr1i1a, vdr
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9PTN2 (4-End)
      • expression tag (1-3)
  • Chain 'B':
    Compound: SRC-1 (LXXLL motif) from Nuclear receptor coactivator 1
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MG, C5D, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3dr1A (A:)
gshmlsdeqmqiinslveahhktyddsysdfvrfrppvregpvtrsasraaslhslsdas
sdsfnhspesvdtklnfsnllmmyqdsgspdsseedqqsrlsmlphladlvsysiqkvig
fakmipgfrdltaedqiallkssaieiimlrsnqsfsledmswscggpdfkycindvtka
ghtlelleplvkfqvglkklklheeehvllmaicllspdrpgvqdhvriealqdrlcdvl
qayiriqhpggrllyakmiqkladlrslneehskqyrslsfqpehsmqltplvlevfgse
vs

    Sequence, based on observed residues (ATOM records):
    >3dr1A (A:)
shmlsdeqmqiinslveahhktyddsysdfvrfrppvrrlsmlphladlvsysiqkvigf
akmipgfrdltaedqiallkssaieiimlrsnqsfsledmswscggpdfkycindvtkag
htlelleplvkfqvglkklklheeehvllmaicllspdrpgvqdhvriealqdrlcdvlq
ayiriqhpggrllyakmiqkladlrslneehskqyrslsfqpehsmqltplvlevfgsev

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3dr1B (B:)
rhkilhrllqegsps

    Sequence, based on observed residues (ATOM records):
    >3dr1B (B:)
rhkilhrllqe