PDB entry 3dp6

View 3dp6 on RCSB PDB site
Description: Crystal structure of the binding domain of the AMPA subunit GluR2 bound to glutamate
Class: signaling protein
Keywords: glutamate receptor, glur2, AMPA receptor, neurotransmitter receptor, S1S2, Alternative splicing, Cell junction, Endoplasmic reticulum, Glycoprotein, Ion transport, Ionic channel, Lipoprotein, Membrane, Palmitate, Phosphoprotein, Postsynaptic cell membrane, RNA editing, Synapse, Transmembrane, Transport, SIGNALING PROTEIN
Deposited on 2008-07-07, released 2008-11-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-08-02, with a file datestamp of 2017-07-28.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate receptor 2
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Gria2, Glur2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P19491 (Start-132)
      • linker (133-134)
    • Uniprot P19491 (135-End)
      • linker (133-134)
    Domains in SCOPe 2.08: d3dp6a_
  • Chain 'B':
    Compound: Glutamate receptor 2
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Gria2, Glur2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P19491 (Start-132)
      • linker (133-134)
    • Uniprot P19491 (135-End)
      • linker (133-134)
    Domains in SCOPe 2.08: d3dp6b_
  • Chain 'C':
    Compound: Glutamate receptor 2
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Gria2, Glur2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P19491 (Start-132)
      • linker (133-134)
    • Uniprot P19491 (135-End)
      • linker (133-134)
    Domains in SCOPe 2.08: d3dp6c_
  • Heterogens: ZN, GLU, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3dp6A (A:)
lvprgsamgsgndtsrganktvvvttilespyvmmkknhemlegneryegycvdlaaeia
khcgfkykltivgdgkygardadtkiwngmvgelvygkadiaiapltitlvreevidfsk
pfmslgisimikkgtpiesaedlskqteiaygtldsgstkeffrrskiavfdkmwtymrs
aepsvfvrttaegvarvrkskgkyayllestmneyieqrkpcdtmkvggnldskgygiat
pkgsslgnavnlavlklneqglldklknkwwydkgecgs

    Sequence, based on observed residues (ATOM records): (download) 
    >3dp6A (A:)
ktvvvttilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgkyga
rdadtkiwngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkgtpies
aedlskqteiaygtldsgstkeffrrskiavfdkmwtymrsaepsvfvrttaegvarvrk
skgkyayllestmneyieqrkpcdtmkvggnldskgygiatpkgsslgnavnlavlklne
qglldklknkwwydkgec

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3dp6B (B:)
lvprgsamgsgndtsrganktvvvttilespyvmmkknhemlegneryegycvdlaaeia
khcgfkykltivgdgkygardadtkiwngmvgelvygkadiaiapltitlvreevidfsk
pfmslgisimikkgtpiesaedlskqteiaygtldsgstkeffrrskiavfdkmwtymrs
aepsvfvrttaegvarvrkskgkyayllestmneyieqrkpcdtmkvggnldskgygiat
pkgsslgnavnlavlklneqglldklknkwwydkgecgs

    Sequence, based on observed residues (ATOM records): (download) 
    >3dp6B (B:)
ktvvvttilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgkyga
rdadtkiwngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkgtpies
aedlskqteiaygtldsgstkeffrrskiavfdkmwtymrsaepsvfvrttaegvarvrk
skgkyayllestmneyieqrkpcdtmkvggnldskgygiatpkgsslgnavnlavlklne
qglldklknkwwydkgec

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3dp6C (C:)
lvprgsamgsgndtsrganktvvvttilespyvmmkknhemlegneryegycvdlaaeia
khcgfkykltivgdgkygardadtkiwngmvgelvygkadiaiapltitlvreevidfsk
pfmslgisimikkgtpiesaedlskqteiaygtldsgstkeffrrskiavfdkmwtymrs
aepsvfvrttaegvarvrkskgkyayllestmneyieqrkpcdtmkvggnldskgygiat
pkgsslgnavnlavlklneqglldklknkwwydkgecgs

    Sequence, based on observed residues (ATOM records): (download) 
    >3dp6C (C:)
ktvvvttilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgkyga
rdadtkiwngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkgtpies
aedlskqteiaygtldsgstkeffrrskiavfdkmwtymrsaepsvfvrttaegvarvrk
skgkyayllestmneyieqrkpcdtmkvggnldskgygiatpkgsslgnavnlavlklne
qglldklknkwwydkgec