PDB entry 3dnf

View 3dnf on RCSB PDB site
Description: Structure of (E)-4-Hydroxy-3-methyl-but-2-enyl Diphosphate Reductase, the Terminal Enzyme of the Non-Mevalonate Pathway
Class: oxidoreductase
Keywords: trilobal strucure, open alpha/beta, Iron, Iron-sulfur, Isoprene biosynthesis, Metal-binding, NADP, Oxidoreductase
Deposited on 2008-07-02, released 2008-12-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-09-09, with a file datestamp of 2020-09-04.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: N/A
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: ispH, lytB, aq_1739
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dnfa_
  • Chain 'B':
    Compound: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: ispH, lytB, aq_1739
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dnfb_
  • Heterogens: F3S, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3dnfA (A:)
mvdiiiaehagfcfgvkravklaeeslkesqgkvytlgpiihnpqevnrlknlgvfpsqg
eefkegdtviirshgippekeealrkkglkvidatcpyvkavheavcqltregyfvvlvg
eknhpevigtlgylracngkgivvetledigealkhervgivaqttqneeffkevvgeia
lwvkevkvinticnatslrqesvkklapevdvmiiiggknsgntrrlyyiskelnpntyh
ietaeelqpewfrgvkrvgisagastpdwiieqvksriqeicegqlvssrshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dnfA (A:)
mvdiiiaehagfcfgvkravklaeeslkesqgkvytlgpiihnpqevnrlknlgvfpsqg
eefkegdtviirshgippekeealrkkglkvidatcpyvkavheavcqltregyfvvlvg
eknhpevigtlgylracngkgivvetledigealkhervgivaqttqneeffkevvgeia
lwvkevkvinticnatslrqesvkklapevdvmiiiggknsgntrrlyyiskelnpntyh
ietaeelqpewfrgvkrvgisagastpdwiieqvksriqei

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3dnfB (B:)
mvdiiiaehagfcfgvkravklaeeslkesqgkvytlgpiihnpqevnrlknlgvfpsqg
eefkegdtviirshgippekeealrkkglkvidatcpyvkavheavcqltregyfvvlvg
eknhpevigtlgylracngkgivvetledigealkhervgivaqttqneeffkevvgeia
lwvkevkvinticnatslrqesvkklapevdvmiiiggknsgntrrlyyiskelnpntyh
ietaeelqpewfrgvkrvgisagastpdwiieqvksriqeicegqlvssrshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dnfB (B:)
mvdiiiaehagfcfgvkravklaeeslkesqgkvytlgpiihnpqevnrlknlgvfpsqg
eefkegdtviirshgippekeealrkkglkvidatcpyvkavheavcqltregyfvvlvg
eknhpevigtlgylracngkgivvetledigealkhervgivaqttqneeffkevvgeia
lwvkevkvinticnatslrqesvkklapevdvmiiiggknsgntrrlyyiskelnpntyh
ietaeelqpewfrgvkrvgisagastpdwiieqvksriqeic