PDB entry 3dmy

View 3dmy on RCSB PDB site
Description: crystal structure of a predicated acyl-coa synthetase from e.coli
Deposited on 2008-07-01, released 2008-08-05
The last revision was dated 2021-02-10, with a file datestamp of 2021-02-05.
Experiment type: XRAY
Resolution: 2.07 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein fdrA
    Species: Escherichia coli [TaxId:83333]
    Gene: fdrA, ylbD, b0518, JW0506
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Protein fdrA
    Species: Escherichia coli [TaxId:83333]
    Gene: fdrA, ylbD, b0518, JW0506
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3dmyA (A:)
mqqleealkqlaqgsgssqaltqvrrwdsacqklpdanlalisvageyaaelanqaldrn
lnvmmfsdnvtledeiqlktrarekgllvmgpdcgtsmiagtplafanvmpegnigviga
sgtgiqelcsqialagegithaiglggrdlsrevggisaltalemlsadeksevlafvsk
ppaeavrlkivnamkatgkptvalflgytpavardenvwfassldeaarlacllsrvtar
rnaiapvssgficglytggtlaaeaagllaghlgveaddthqhgmmldadshqiidlgdd
fytvgrphpmidptlrnqliadlgakpqvrvllldvvigfgatadpaaslvsawqkacaa
rldnqplyaiatvtgterdpqcrsqqiatledagiavvsslpeatllaaalihplspaaq
qhtpsllenvaviniglrsfalelqsaskpvvhyqwspvaggnkklarllerlqghphhh

    Sequence, based on observed residues (ATOM records):
    >3dmyA (A:)
altqvrrwdsacqklpdanlalisvageyaaelanqaldrnlnvmmfsdnvtledeiqlk
trarekgllvmgpdcgtsmiagtplafanvmpegnigvigasgtgiqelcsqialagegi
thaiglggrdlsrevggisaltalemlsadeksevlafvskppaeavrlkivnamkatgk
ptvalflgytpavardenvwfassldeaarlacllsrvtarrnaiapvssgficglytgg
tlaaeaagllaghlgvethqhgmmldadshqiidlgddfytvgrphpmidptlrnqliad
lgakpqvrvllldvvigfgatadpaaslvsawqkacaarldnqplyaiatvtgterdpqc
rsqqiatledagiavvsslpeatllaaalihplshtpsllenvaviniglrsfalelqsa
skpvvhyqwspvaggnkklarllerlq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3dmyB (B:)
mqqleealkqlaqgsgssqaltqvrrwdsacqklpdanlalisvageyaaelanqaldrn
lnvmmfsdnvtledeiqlktrarekgllvmgpdcgtsmiagtplafanvmpegnigviga
sgtgiqelcsqialagegithaiglggrdlsrevggisaltalemlsadeksevlafvsk
ppaeavrlkivnamkatgkptvalflgytpavardenvwfassldeaarlacllsrvtar
rnaiapvssgficglytggtlaaeaagllaghlgveaddthqhgmmldadshqiidlgdd
fytvgrphpmidptlrnqliadlgakpqvrvllldvvigfgatadpaaslvsawqkacaa
rldnqplyaiatvtgterdpqcrsqqiatledagiavvsslpeatllaaalihplspaaq
qhtpsllenvaviniglrsfalelqsaskpvvhyqwspvaggnkklarllerlqghphhh

    Sequence, based on observed residues (ATOM records):
    >3dmyB (B:)
altqvrrwdsacqklpdanlalisvageyaaelanqaldrnlnvmmfsdnvtledeiqlk
trarekgllvmgpdcgtsmiagtplafanvmpegnigvigasgtgiqelcsqialagegi
thaiglggrdlsrevggisaltalemlsadeksevlafvskppaeavrlkivnamkatgk
ptvalflgytpavardenvwfassldeaarlacllsrvtarrnaiapvssgficglytgg
tlaaeaagllaghlgveahqhgmmldadshqiidlgddfytvgrphpmidptlrnqliad
lgakpqvrvllldvvigfgatadpaaslvsawqkacaarldnqplyaiatvtgterdpqc
rsqqiatledagiavvsslpeatllaaalihplhtpsllenvaviniglrsfalelqsas
kpvvhyqwspvaggnkklarllerlq