PDB entry 3dms

View 3dms on RCSB PDB site
Description: 1.65A crystal structure of isocitrate dehydrogenase from Burkholderia pseudomallei
Class: oxidoreductase
Keywords: BURKHOLDERIA, PSEUDOMALLEI, ISOCITRATE, DEHYDROGENASE, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID, Glyoxylate bypass, Manganese, Metal-binding, NADP, Oxidoreductase, Tricarboxylic acid cycle
Deposited on 2008-07-01, released 2008-07-15
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: N/A
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Isocitrate dehydrogenase [NADP]
    Species: Burkholderia pseudomallei [TaxId:28450]
    Gene: icd, BPSL0896
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3dmsa_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3dmsA (A:)
    mahhhhhhmpyqhikvpeggdkitvnkdfslnvsdqpiipyiegdgtgfditpvmikvvd
    aavekayggkkkihwmeiyagekatkvygpdvwlpeetlqvlkeyvvsikgplttpvggg
    irslnvalrqeldlyvclrpiqyfkgvpspvrepektnmvifrensediyagiewaaese
    qakkvikflqeemgvkkirfpqtsgigikpvskegterlvrkaiqyaidndrksvtlvhk
    gnimkftegafrdagyalaqkefgaelidggpwmkfknpktgneivvkdsiadaflqqil
    lrpaeydviatlnlngdyisdalaaqvggigiapganlsdsvamfeathgtapkyagkdy
    vnpgseilsaemmlrhlgwteaadviisameksikqkrvtydfarlmegatqvscsgfgq
    vlienme
    

    Sequence, based on observed residues (ATOM records): (download)
    >3dmsA (A:)
    yqhikvpeggdkitvnkdfslnvsdqpiipyiegdgtgfditpvmikvvdaavekayggk
    kkihwmeiyagekatkvygpdvwlpeetlqvlkeyvvsikgplttpvrslnvalrqeldl
    yvclrpiqyfkgvpspvrepektnmvifrensediyagiewaaeseqakkvikflqeemg
    vkkirfpqtsgigikpvskegterlvrkaiqyaidndrksvtlvhkgnimkftegafrda
    gyalaqkefgaelidggpwmkfknpktgneivvkdsiadaflqqillrpaeydviatlnl
    ngdyisdalaaqvggigiapganlsdsvamfeathgtapkyagkdyvnpgseilsaemml
    rhlgwteaadviisameksikqkrvtydfarlmegatqvscsgfgqvlienme