PDB entry 3dmk

View 3dmk on RCSB PDB site
Description: crystal structure of down syndrome cell adhesion molecule (dscam) isoform 1.30.30, n-terminal eight ig domains
Deposited on 2008-07-01, released 2008-10-07
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 4.19 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, N-terminal eight Ig domains
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Dscam
    Database cross-references and differences (RAF-indexed):
    • PDB 3DMK (Start-809)
  • Chain 'B':
    Compound: Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, N-terminal eight Ig domains
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Dscam
    Database cross-references and differences (RAF-indexed):
    • PDB 3DMK
  • Chain 'C':
    Compound: Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, N-terminal eight Ig domains
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Dscam
    Database cross-references and differences (RAF-indexed):
    • PDB 3DMK
  • Heterogens: GOL, SO4

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3dmkA (A:)
mnmpnerlkwlmlfaavaliacgsqtlaanppdadqkgpvflkeptnridfsnstgaeie
ckasgnpmpeiiwirsdgtavgdvpglrqissdgklvfppfraedyrqevhaqvyaclar
nqfgsiisrdvhvravvaqyyeadvnkehvirgnsavikclipsfvadfvevvswhtdee
enyfpgaeydgkylvlpsgelhirevgpedgyksyqcrtkhrltgetrlsatkgrlvite
pissavpkvvslakfdmktysgsstmallcpaqgypvpvfrwykfiegttrkqavvlndr
vkqvsgtliikdavvedsgkylcvvnnsvggesvetvltvtaplsakidpptqtvdfgrp
avftcqytgnpiktvswmkdgkaighsesvlriesvkkedkgmyqcfvrndresaeasae
lklggrfdppvirqafqeetmepgpsvflkcvaggnptpeisweldgkkianndryqvgq
yvtvngdvvsylnitsvhandgglykciakskvgvaehsaklnvyglpyirqmekkaiva
getlivtcpvagypidsivwerdnralpinrkqkvfpngtliienvernsdqatytcvak
nqegysargslevqvmvlpriipfafeegpaqvgqyltlhcsvpggdlplnidwtldgqa
isedlgittsrvgrrgsvltieaveashagnftcharnlaghqqfttplnvyvpprwile
ptdkafaqgsdakveckadgfpkpqvtwkkavgdtpgeykdlkksdnirveegtlhvdni
qktnegyylceaingigsglsavimisvqahhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dmkA (A:)
qkgpvflkeptnridfsnstgaeieckasgnpmpeiiwirsdgtavgdvpglrqissdgk
lvfppfraedyrqevhaqvyaclarnqfgsiisrdvhvravvaqyyeadvnkehvirgns
avikclipsfvadfvevvswhtdeeenyfpgaeydgkylvlpsgelhirevgpedgyksy
qcrtkhrltgetrlsatkgrlvitepissavpkvvslakfdmktysgsstmallcpaqgy
pvpvfrwykfiegttrkqavvlndrvkqvsgtliikdavvedsgkylcvvnnsvggesve
tvltvtaplsakidpptqtvdfgrpavftcqytgnpiktvswmkdgkaighsesvlries
vkkedkgmyqcfvrndresaeasaelklggrfdppvirqafqeetmepgpsvflkcvagg
nptpeisweldgkkianndryqvgqyvtvngdvvsylnitsvhandgglykciakskvgv
aehsaklnvyglpyirqmekkaivagetlivtcpvagypidsivwerdnralpinrkqkv
fpngtliienvernsdqatytcvaknqegysargslevqvmvlpriipfafeegpaqvgq
yltlhcsvpggdlplnidwtldgqaisedlgittsrvgrrgsvltieaveashagnftch
arnlaghqqfttplnvyvpprwileptdkafaqgsdakveckadgfpkpqvtwkkavgdt
pgeykdlkksdnirveegtlhvdniqktnegyylceaingigsglsavimisvqa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3dmkB (B:)
mnmpnerlkwlmlfaavaliacgsqtlaanppdadqkgpvflkeptnridfsnstgaeie
ckasgnpmpeiiwirsdgtavgdvpglrqissdgklvfppfraedyrqevhaqvyaclar
nqfgsiisrdvhvravvaqyyeadvnkehvirgnsavikclipsfvadfvevvswhtdee
enyfpgaeydgkylvlpsgelhirevgpedgyksyqcrtkhrltgetrlsatkgrlvite
pissavpkvvslakfdmktysgsstmallcpaqgypvpvfrwykfiegttrkqavvlndr
vkqvsgtliikdavvedsgkylcvvnnsvggesvetvltvtaplsakidpptqtvdfgrp
avftcqytgnpiktvswmkdgkaighsesvlriesvkkedkgmyqcfvrndresaeasae
lklggrfdppvirqafqeetmepgpsvflkcvaggnptpeisweldgkkianndryqvgq
yvtvngdvvsylnitsvhandgglykciakskvgvaehsaklnvyglpyirqmekkaiva
getlivtcpvagypidsivwerdnralpinrkqkvfpngtliienvernsdqatytcvak
nqegysargslevqvmvlpriipfafeegpaqvgqyltlhcsvpggdlplnidwtldgqa
isedlgittsrvgrrgsvltieaveashagnftcharnlaghqqfttplnvyvpprwile
ptdkafaqgsdakveckadgfpkpqvtwkkavgdtpgeykdlkksdnirveegtlhvdni
qktnegyylceaingigsglsavimisvqahhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dmkB (B:)
qkgpvflkeptnridfsnstgaeieckasgnpmpeiiwirsdgtavgdvpglrqissdgk
lvfppfraedyrqevhaqvyaclarnqfgsiisrdvhvravvaqyyeadvnkehvirgns
avikclipsfvadfvevvswhtdeeenyfpgaeydgkylvlpsgelhirevgpedgyksy
qcrtkhrltgetrlsatkgrlvitepissavpkvvslakfdmktysgsstmallcpaqgy
pvpvfrwykfiegttrkqavvlndrvkqvsgtliikdavvedsgkylcvvnnsvggesve
tvltvtaplsakidpptqtvdfgrpavftcqytgnpiktvswmkdgkaighsesvlries
vkkedkgmyqcfvrndresaeasaelklggrfdppvirqafqeetmepgpsvflkcvagg
nptpeisweldgkkianndryqvgqyvtvngdvvsylnitsvhandgglykciakskvgv
aehsaklnvyglpyirqmekkaivagetlivtcpvagypidsivwerdnralpinrkqkv
fpngtliienvernsdqatytcvaknqegysargslevqvmvlpriipfafeegpaqvgq
yltlhcsvpggdlplnidwtldgqaisedlgittsrvgrrgsvltieaveashagnftch
arnlaghqqfttplnv

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3dmkC (C:)
mnmpnerlkwlmlfaavaliacgsqtlaanppdadqkgpvflkeptnridfsnstgaeie
ckasgnpmpeiiwirsdgtavgdvpglrqissdgklvfppfraedyrqevhaqvyaclar
nqfgsiisrdvhvravvaqyyeadvnkehvirgnsavikclipsfvadfvevvswhtdee
enyfpgaeydgkylvlpsgelhirevgpedgyksyqcrtkhrltgetrlsatkgrlvite
pissavpkvvslakfdmktysgsstmallcpaqgypvpvfrwykfiegttrkqavvlndr
vkqvsgtliikdavvedsgkylcvvnnsvggesvetvltvtaplsakidpptqtvdfgrp
avftcqytgnpiktvswmkdgkaighsesvlriesvkkedkgmyqcfvrndresaeasae
lklggrfdppvirqafqeetmepgpsvflkcvaggnptpeisweldgkkianndryqvgq
yvtvngdvvsylnitsvhandgglykciakskvgvaehsaklnvyglpyirqmekkaiva
getlivtcpvagypidsivwerdnralpinrkqkvfpngtliienvernsdqatytcvak
nqegysargslevqvmvlpriipfafeegpaqvgqyltlhcsvpggdlplnidwtldgqa
isedlgittsrvgrrgsvltieaveashagnftcharnlaghqqfttplnvyvpprwile
ptdkafaqgsdakveckadgfpkpqvtwkkavgdtpgeykdlkksdnirveegtlhvdni
qktnegyylceaingigsglsavimisvqahhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dmkC (C:)
qkgpvflkeptnridfsnstgaeieckasgnpmpeiiwirsdgtavgdvpglrqissdgk
lvfppfraedyrqevhaqvyaclarnqfgsiisrdvhvravvaqyyeadvnkehvirgns
avikclipsfvadfvevvswhtdeeenyfpgaeydgkylvlpsgelhirevgpedgyksy
qcrtkhrltgetrlsatkgrlvitepissavpkvvslakfdmktysgsstmallcpaqgy
pvpvfrwykfiegttrkqavvlndrvkqvsgtliikdavvedsgkylcvvnnsvggesve
tvltvtaplsakidpptqtvdfgrpavftcqytgnpiktvswmkdgkaighsesvlries
vkkedkgmyqcfvrndresaeasaelklggrfdppvirqafqeetmepgpsvflkcvagg
nptpeisweldgkkianndryqvgqyvtvngdvvsylnitsvhandgglykciakskvgv
aehsaklnvyglpyirqmekkaivagetlivtcpvagypidsivwerdnralpinrkqkv
fpngtliienvernsdqatytcvaknqegysargslevqvmvlpriipfafeegpaqvgq
yltlhcsvpggdlplnidwtldgqaisedlgittsrvgrrgsvltieaveashagnftch
arnlaghqqfttplnv