PDB entry 3dlv

View 3dlv on RCSB PDB site
Description: Structures of SRP54 and SRP19, the two proteins assembling the ribonucleic core of the Signal Recognition Particle from the archaeon Pyrococcus furiosus.
Class: RNA binding protein
Keywords: PROTEIN-RNA, SIGNAL RECOGNITION PARTICLE, Cytoplasm, Ribonucleoprotein, RNA-binding, RNA BINDING PROTEIN
Deposited on 2008-06-29, released 2008-11-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 1.87 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: signal recognition particle 19 kda protein
    Species: Pyrococcus furiosus [TaxId:2261]
    Gene: srp19, PF1894
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dlva_
  • Chain 'B':
    Compound: signal recognition particle 19 kda protein
    Species: Pyrococcus furiosus [TaxId:2261]
    Gene: srp19, PF1894
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8TZT9 (Start-99)
      • expression tag (100-104)
    Domains in SCOPe 2.08: d3dlvb1, d3dlvb2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3dlvA (A:)
mgrfvvwpseldsrlsrkygrivprsiavesprveeivraaeelkfkvirveedklnprl
sgideelrtfgmivlespygkskslkliaqkirefrrrsagtlvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >3dlvA (A:)
grfvvwpseldsrlsrkygrivprsiavesprveeivraaeelkfkvirveedklnpelr
tfgmivlespygkskslkliaqkirefrrrsa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3dlvB (B:)
mgrfvvwpseldsrlsrkygrivprsiavesprveeivraaeelkfkvirveedklnprl
sgideelrtfgmivlespygkskslkliaqkirefrrrsagtlvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >3dlvB (B:)
grfvvwpseldsrlsrkygrivprsiavesprveeivraaeelkfkvirveedklnpeel
rtfgmivlespygkskslkliaqkirefrrrsagtlvp