PDB entry 3dkq

View 3dkq on RCSB PDB site
Description: crystal structure of putative oxygenase (yp_001051978.1) from shewanella baltica os155 at 2.26 a resolution
Deposited on 2008-06-25, released 2008-08-12
The last revision was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 2.26 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PKHD-type hydroxylase Sbal_3634
    Species: Shewanella baltica OS155 [TaxId:325240]
    Gene: YP_001051978.1, Sbal_3634
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3D8P6 (19-242)
      • leader sequence (13-18)
  • Chain 'B':
    Compound: PKHD-type hydroxylase Sbal_3634
    Species: Shewanella baltica OS155 [TaxId:325240]
    Gene: YP_001051978.1, Sbal_3634
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3D8P6 (19-242)
      • leader sequence (13-18)
  • Chain 'C':
    Compound: PKHD-type hydroxylase Sbal_3634
    Species: Shewanella baltica OS155 [TaxId:325240]
    Gene: YP_001051978.1, Sbal_3634
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3D8P6 (19-242)
      • leader sequence (14-18)
  • Heterogens: NI, IMD, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3dkqA (A:)
mgsdkihhhhhhenlyfqgmlieipnvfskqevshlreqldarrwidgnqtsgamattrk
rnqqldkddpvavalgqqimdrllahpqfvsaalplqfypplfnryqggetfgyhidnai
rstpdgmirtdlsatlflsepenyqggelviqdtygqqsiklsagslvlypssslhqvtp
vlsgertaafmwlqsmvrdegqrrllfqldqsiqsltaqtaaeqelfnlsgvyhnllrrw
sel

    Sequence, based on observed residues (ATOM records):
    >3dkqA (A:)
nlyfqgmlieipnvfskqevshlreqldarrwidgnqtsgamattrkrnqqldkddpvav
algqqimdrllahpqfvsaalplqfypplfnryqggetfgyhidnairstpdgmirtdls
atlflsepenyqggelviqdtygqqsiklsagslvlypssslhqvtpvlsgertaafmwl
qsmvrdegqrrllfqldqsiqsltaqtaaeqelfnlsgvyhnllrrwsel

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3dkqB (B:)
mgsdkihhhhhhenlyfqgmlieipnvfskqevshlreqldarrwidgnqtsgamattrk
rnqqldkddpvavalgqqimdrllahpqfvsaalplqfypplfnryqggetfgyhidnai
rstpdgmirtdlsatlflsepenyqggelviqdtygqqsiklsagslvlypssslhqvtp
vlsgertaafmwlqsmvrdegqrrllfqldqsiqsltaqtaaeqelfnlsgvyhnllrrw
sel

    Sequence, based on observed residues (ATOM records):
    >3dkqB (B:)
nlyfqgmlieipnvfskqevshlreqldarrwidgrnqqldkddpvavalgqqimdrlla
hpqfvsaalplqfypplfnryqggetfgyhidrtdlsatlflsepenyqggelviqdtyg
qqsiklsagslvlypssslhqvtpvlsgertaafmwlqsmvrdegqrrllfqldqsiqsl
taqtaaeqelfnlsgvyhnllrrwsel

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3dkqC (C:)
mgsdkihhhhhhenlyfqgmlieipnvfskqevshlreqldarrwidgnqtsgamattrk
rnqqldkddpvavalgqqimdrllahpqfvsaalplqfypplfnryqggetfgyhidnai
rstpdgmirtdlsatlflsepenyqggelviqdtygqqsiklsagslvlypssslhqvtp
vlsgertaafmwlqsmvrdegqrrllfqldqsiqsltaqtaaeqelfnlsgvyhnllrrw
sel

    Sequence, based on observed residues (ATOM records):
    >3dkqC (C:)
lyfqgmlieipnvfskqevshlreqldarrwidgnqrkrnqqldkddpvavalgqqimdr
llahpqfvsaalplqfypplfnryqggetfgyhidnairstpdgmirtdlsatlflsepe
nyqggelviqdtygqqsiklsagslvlypssslhqvtpvlsgertaafmwlqsmvrdegq
rrllfqldqsiqsltaqtaaeqelfnlsgvyhnllrrwsel