PDB entry 3dkb

View 3dkb on RCSB PDB site
Description: crystal structure of a20, 2.5 angstrom
Deposited on 2008-06-24, released 2008-07-08
The last revision was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Tumor necrosis factor, alpha-induced protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFAIP3
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Tumor necrosis factor, alpha-induced protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFAIP3
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Tumor necrosis factor, alpha-induced protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFAIP3
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Tumor necrosis factor, alpha-induced protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFAIP3
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Tumor necrosis factor, alpha-induced protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFAIP3
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Tumor necrosis factor, alpha-induced protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFAIP3
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3dkbA (A:)
mgsshhhhhhssglvprgshmaeqvlpqalylsnmrkavkirertpedifkptngiihhf
ktmhrytlemfrtcqfcpqfreiihkalidrniqatlesqkklnwcrevrklvalktngd
gnclmhatsqymwgvqdtdlvlrkalfstlketdtrnfkfrwqleslksqefvetglcyd
trnwndewdnlikmastdtpmarsglqynsleeihifvlcnilrrpiivisdkmlrsles
gsnfaplkvggiylplhwpaqecyrypivlgydshhfvplvtlkdsgpeiravplvnrdr
grfedlkvhfltdpenemkekllkeylmvieipvqgwdhgtthlinaakldeanlpkein
lvddyfelvqheykkwqenseqgrreghaq

    Sequence, based on observed residues (ATOM records):
    >3dkbA (A:)
eqvlpqalylsnmrkavkirertpedifkptngiihhfktmhrytlemfrtcqfcpqfre
iihkalidrniqatlesqkklnwcrevrklvalktngdgnclmhatsqymwgvqdtdlvl
rkalfstlketdtrnfkfrwqleslksqefveydtrnwndewdnlikmastdtpmarsgl
qynsleeihifvlcnilrrpiivisdkmlrslesgplkvggiylplhwpaqecyrypivl
gydshhfvplvtlkdsgpeiravplvnrdrgrfedlkvhfltdpenemkekllkeylmvi
eipvqgwdhgtthlinaakldeanlpkeinlvddyfelvqheykkwqenseq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3dkbB (B:)
mgsshhhhhhssglvprgshmaeqvlpqalylsnmrkavkirertpedifkptngiihhf
ktmhrytlemfrtcqfcpqfreiihkalidrniqatlesqkklnwcrevrklvalktngd
gnclmhatsqymwgvqdtdlvlrkalfstlketdtrnfkfrwqleslksqefvetglcyd
trnwndewdnlikmastdtpmarsglqynsleeihifvlcnilrrpiivisdkmlrsles
gsnfaplkvggiylplhwpaqecyrypivlgydshhfvplvtlkdsgpeiravplvnrdr
grfedlkvhfltdpenemkekllkeylmvieipvqgwdhgtthlinaakldeanlpkein
lvddyfelvqheykkwqenseqgrreghaq

    Sequence, based on observed residues (ATOM records):
    >3dkbB (B:)
eqvlpqalylsnmrkavkirertpedifkptngiihhfktmhrytlemfrtcqfcpqfre
iihkalidrniqatlesqkklnwcrevrklvalktngdgnclmhatsqymwgvqdtdlvl
rkalfstlketdtrnfkfrwqleslksqefveydtrnwndewdnlikmastdtpmarsgl
qynsleeihifvlcnilrrpiivisdkmlrslesgplkvggiylplhwpaqecyrypivl
gydshhfvplvtlkdsgpeiravplvnrdrgrfedlkvhfltdpenemkekllkeylmvi
eipvqgwdhgtthlinaakldeanlpkeinlvddyfelvqheykkwqenseq

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3dkbC (C:)
mgsshhhhhhssglvprgshmaeqvlpqalylsnmrkavkirertpedifkptngiihhf
ktmhrytlemfrtcqfcpqfreiihkalidrniqatlesqkklnwcrevrklvalktngd
gnclmhatsqymwgvqdtdlvlrkalfstlketdtrnfkfrwqleslksqefvetglcyd
trnwndewdnlikmastdtpmarsglqynsleeihifvlcnilrrpiivisdkmlrsles
gsnfaplkvggiylplhwpaqecyrypivlgydshhfvplvtlkdsgpeiravplvnrdr
grfedlkvhfltdpenemkekllkeylmvieipvqgwdhgtthlinaakldeanlpkein
lvddyfelvqheykkwqenseqgrreghaq

    Sequence, based on observed residues (ATOM records):
    >3dkbC (C:)
eqvlpqalylsnmrkavkirertpedifkptngiihhfktmhrytlemfrtcqfcpqfre
iihkalidrniqatlesqkklnwcrevrklvalktngdgnclmhatsqymwgvqdtdlvl
rkalfstlketdtrnfkfrwqleslksqefveydtrnwndewdnlikmastdtpmarsgl
qynsleeihifvlcnilrrpiivisdkmlrslesgplkvggiylplhwpaqecyrypivl
gydshhfvplvtlkdsgpeiravplvnrdrgrfedlkvhfltdpenemkekllkeylmvi
eipvqgwdhgtthlinaakldeanlpkeinlvddyfelvqheykkwqenseq

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3dkbD (D:)
mgsshhhhhhssglvprgshmaeqvlpqalylsnmrkavkirertpedifkptngiihhf
ktmhrytlemfrtcqfcpqfreiihkalidrniqatlesqkklnwcrevrklvalktngd
gnclmhatsqymwgvqdtdlvlrkalfstlketdtrnfkfrwqleslksqefvetglcyd
trnwndewdnlikmastdtpmarsglqynsleeihifvlcnilrrpiivisdkmlrsles
gsnfaplkvggiylplhwpaqecyrypivlgydshhfvplvtlkdsgpeiravplvnrdr
grfedlkvhfltdpenemkekllkeylmvieipvqgwdhgtthlinaakldeanlpkein
lvddyfelvqheykkwqenseqgrreghaq

    Sequence, based on observed residues (ATOM records):
    >3dkbD (D:)
eqvlpqalylsnmrkavkirertpedifkptngiihhfktmhrytlemfrtcqfcpqfre
iihkalidrniqatlesqkklnwcrevrklvalktngdgnclmhatsqymwgvqdtdlvl
rkalfstlketdtrnfkfrwqleslksqefveydtrnwndewdnlikmastdtpmarsgl
qynsleeihifvlcnilrrpiivisdkmlrslesgplkvggiylplhwpaqecyrypivl
gydshhfvplvtlkdsgpeiravplvnrdrgrfedlkvhfltdpenemkekllkeylmvi
eipvqgwdhgtthlinaakldeanlpkeinlvddyfelvqheykkwqenseq

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3dkbE (E:)
mgsshhhhhhssglvprgshmaeqvlpqalylsnmrkavkirertpedifkptngiihhf
ktmhrytlemfrtcqfcpqfreiihkalidrniqatlesqkklnwcrevrklvalktngd
gnclmhatsqymwgvqdtdlvlrkalfstlketdtrnfkfrwqleslksqefvetglcyd
trnwndewdnlikmastdtpmarsglqynsleeihifvlcnilrrpiivisdkmlrsles
gsnfaplkvggiylplhwpaqecyrypivlgydshhfvplvtlkdsgpeiravplvnrdr
grfedlkvhfltdpenemkekllkeylmvieipvqgwdhgtthlinaakldeanlpkein
lvddyfelvqheykkwqenseqgrreghaq

    Sequence, based on observed residues (ATOM records):
    >3dkbE (E:)
eqvlpqalylsnmrkavkirertpedifkptngiihhfktmhrytlemfrtcqfcpqfre
iihkalidrniqatlesqkklnwcrevrklvalktngdgnclmhatsqymwgvqdtdlvl
rkalfstlketdtrnfkfrwqleslksqefveydtrnwndewdnlikmastdtpmarsgl
qynsleeihifvlcnilrrpiivisdkmlrslesgplkvggiylplhwpaqecyrypivl
gydshhfvplvtlkdsgpeiravplvnrdrgrfedlkvhfltdpenemkekllkeylmvi
eipvqgwdhgtthlinaakldeanlpkeinlvddyfelvqheykkwqenseq

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3dkbF (F:)
mgsshhhhhhssglvprgshmaeqvlpqalylsnmrkavkirertpedifkptngiihhf
ktmhrytlemfrtcqfcpqfreiihkalidrniqatlesqkklnwcrevrklvalktngd
gnclmhatsqymwgvqdtdlvlrkalfstlketdtrnfkfrwqleslksqefvetglcyd
trnwndewdnlikmastdtpmarsglqynsleeihifvlcnilrrpiivisdkmlrsles
gsnfaplkvggiylplhwpaqecyrypivlgydshhfvplvtlkdsgpeiravplvnrdr
grfedlkvhfltdpenemkekllkeylmvieipvqgwdhgtthlinaakldeanlpkein
lvddyfelvqheykkwqenseqgrreghaq

    Sequence, based on observed residues (ATOM records):
    >3dkbF (F:)
eqvlpqalylsnmrkavkirertpedifkptngiihhfktmhrytlemfrtcqfcpqfre
iihkalidrniqatlesqkklnwcrevrklvalktngdgnclmhatsqymwgvqdtdlvl
rkalfstlketdtrnfkfrwqleslksqefveydtrnwndewdnlikmastdtpmarsgl
qynsleeihifvlcnilrrpiivisdkmlrslesgplkvggiylplhwpaqecyrypivl
gydshhfvplvtlkdsgpeiravplvnrdrgrfedlkvhfltdpenemkekllkeylmvi
eipvqgwdhgtthlinaakldeanlpkeinlvddyfelvqheykkwqenseq