PDB entry 3dhr

View 3dhr on RCSB PDB site
Description: Crystal Structure Determination of Methemoglobin from Pigeon at 2 Angstrom Resolution (Columba livia)
Class: oxygen storage, oxygen transport
Keywords: AVIAN HEMOGLOBIN, METHEMOGLOBIN, TRICLINIC, Heme, Iron, Metal-binding, Oxygen transport, Transport, OXYGEN STORAGE
Deposited on 2008-06-18, released 2009-06-30
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-06-30, with a file datestamp of 2009-06-26.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.247
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemoglobin subunit alpha-A
    Species: Columba livia [TaxId:8932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3dhra_
  • Chain 'B':
    Compound: Hemoglobin subunit beta
    Species: Columba livia [TaxId:8932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3dhrb_
  • Chain 'C':
    Compound: Hemoglobin subunit alpha-A
    Species: Columba livia [TaxId:8932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3dhrc_
  • Chain 'D':
    Compound: Hemoglobin subunit beta
    Species: Columba livia [TaxId:8932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3dhrd_
  • Chain 'E':
    Compound: Hemoglobin subunit alpha-A
    Species: Columba livia [TaxId:8932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3dhre_
  • Chain 'F':
    Compound: Hemoglobin subunit beta
    Species: Columba livia [TaxId:8932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3dhrf_
  • Chain 'G':
    Compound: Hemoglobin subunit alpha-A
    Species: Columba livia [TaxId:8932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3dhrg_
  • Chain 'H':
    Compound: Hemoglobin subunit beta
    Species: Columba livia [TaxId:8932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3dhrh_
  • Heterogens: HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3dhrA (A:)
mvlsandksnvkavfakiggqagdlggealerlfitypqtktyfphfdlshgsaqikghg
kkvaealveaanhiddiagalsklsdlhaqklrvdpvnfkllghcflvvvavhfpslltp
evhasldkfvlavgtvltakyr

    Sequence, based on observed residues (ATOM records): (download) 
    >3dhrA (A:)
vlsandksnvkavfakiggqagdlggealerlfitypqtktyfphfdlshgsaqikghgk
kvaealveaanhiddiagalsklsdlhaqklrvdpvnfkllghcflvvvavhfpslltpe
vhasldkfvlavgtvltakyr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3dhrB (B:)
vhwsaeekqlitsiwgkvnvadcgaealarllivypwtqrffssfgnlssataisgnpnv
kahgkkvltsfgdavknldnikgtfaqlselhcdklhvdpenfrllgdilviilaahfgk
dftpecqaawqklvrvvahalarkyh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dhrB (B:)
hwsaeekqlitsiwgkvnvadcgaealarllivypwtqrffssfgnlssataisgnpnvk
ahgkkvltsfgdavknldnikgtfaqlselhcdklhvdpenfrllgdilviilaahfgkd
ftpecqaawqklvrvvahalarkyh

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3dhrC (C:)
mvlsandksnvkavfakiggqagdlggealerlfitypqtktyfphfdlshgsaqikghg
kkvaealveaanhiddiagalsklsdlhaqklrvdpvnfkllghcflvvvavhfpslltp
evhasldkfvlavgtvltakyr

    Sequence, based on observed residues (ATOM records): (download) 
    >3dhrC (C:)
vlsandksnvkavfakiggqagdlggealerlfitypqtktyfphfdlshgsaqikghgk
kvaealveaanhiddiagalsklsdlhaqklrvdpvnfkllghcflvvvavhfpslltpe
vhasldkfvlavgtvltakyr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3dhrD (D:)
vhwsaeekqlitsiwgkvnvadcgaealarllivypwtqrffssfgnlssataisgnpnv
kahgkkvltsfgdavknldnikgtfaqlselhcdklhvdpenfrllgdilviilaahfgk
dftpecqaawqklvrvvahalarkyh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dhrD (D:)
hwsaeekqlitsiwgkvnvadcgaealarllivypwtqrffssfgnlssataisgnpnvk
ahgkkvltsfgdavknldnikgtfaqlselhcdklhvdpenfrllgdilviilaahfgkd
ftpecqaawqklvrvvahalarkyh

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3dhrE (E:)
mvlsandksnvkavfakiggqagdlggealerlfitypqtktyfphfdlshgsaqikghg
kkvaealveaanhiddiagalsklsdlhaqklrvdpvnfkllghcflvvvavhfpslltp
evhasldkfvlavgtvltakyr

    Sequence, based on observed residues (ATOM records): (download) 
    >3dhrE (E:)
vlsandksnvkavfakiggqagdlggealerlfitypqtktyfphfdlshgsaqikghgk
kvaealveaanhiddiagalsklsdlhaqklrvdpvnfkllghcflvvvavhfpslltpe
vhasldkfvlavgtvltakyr

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3dhrF (F:)
vhwsaeekqlitsiwgkvnvadcgaealarllivypwtqrffssfgnlssataisgnpnv
kahgkkvltsfgdavknldnikgtfaqlselhcdklhvdpenfrllgdilviilaahfgk
dftpecqaawqklvrvvahalarkyh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dhrF (F:)
hwsaeekqlitsiwgkvnvadcgaealarllivypwtqrffssfgnlssataisgnpnvk
ahgkkvltsfgdavknldnikgtfaqlselhcdklhvdpenfrllgdilviilaahfgkd
ftpecqaawqklvrvvahalarkyh

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3dhrG (G:)
mvlsandksnvkavfakiggqagdlggealerlfitypqtktyfphfdlshgsaqikghg
kkvaealveaanhiddiagalsklsdlhaqklrvdpvnfkllghcflvvvavhfpslltp
evhasldkfvlavgtvltakyr

    Sequence, based on observed residues (ATOM records): (download) 
    >3dhrG (G:)
vlsandksnvkavfakiggqagdlggealerlfitypqtktyfphfdlshgsaqikghgk
kvaealveaanhiddiagalsklsdlhaqklrvdpvnfkllghcflvvvavhfpslltpe
vhasldkfvlavgtvltakyr

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3dhrH (H:)
vhwsaeekqlitsiwgkvnvadcgaealarllivypwtqrffssfgnlssataisgnpnv
kahgkkvltsfgdavknldnikgtfaqlselhcdklhvdpenfrllgdilviilaahfgk
dftpecqaawqklvrvvahalarkyh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dhrH (H:)
hwsaeekqlitsiwgkvnvadcgaealarllivypwtqrffssfgnlssataisgnpnvk
ahgkkvltsfgdavknldnikgtfaqlselhcdklhvdpenfrllgdilviilaahfgkd
ftpecqaawqklvrvvahalarkyh