PDB entry 3ded

View 3ded on RCSB PDB site
Description: C-terminal domain of Probable hemolysin from Chromobacterium violaceum
Class: membrane protein
Keywords: hemolysin, Chromobacterium violaceum, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, Membrane, Transmembrane, MEMBRANE PROTEIN
Deposited on 2008-06-09, released 2008-08-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-01-31, with a file datestamp of 2018-01-26.
Experiment type: XRAY
Resolution: 2.14 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable hemolysin
    Species: Chromobacterium violaceum [TaxId:536]
    Gene: CV_0231
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3deda1
  • Chain 'B':
    Compound: Probable hemolysin
    Species: Chromobacterium violaceum [TaxId:536]
    Gene: CV_0231
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dedb_
  • Chain 'C':
    Compound: Probable hemolysin
    Species: Chromobacterium violaceum [TaxId:536]
    Gene: CV_0231
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dedc_
  • Chain 'D':
    Compound: Probable hemolysin
    Species: Chromobacterium violaceum [TaxId:536]
    Gene: CV_0231
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dedd_
  • Chain 'E':
    Compound: Probable hemolysin
    Species: Chromobacterium violaceum [TaxId:536]
    Gene: CV_0231
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dede_
  • Chain 'F':
    Compound: Probable hemolysin
    Species: Chromobacterium violaceum [TaxId:536]
    Gene: CV_0231
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dedf_
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3dedA (A:)
mgsshhhhhhssgrenlyfqghdgeedeivqredgswlvdgmvsldrfreffeleaplpg
eaggnihtlagvmlyqlgrvpsvtdrfewngfsfevvdmdrtrvdkilvqrhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dedA (A:)
deivqredgswlvdgmvsldrfreffeleaplpgeaggnihtlagvmlyqlgrvpsvtdr
fewngfsfevvdmdrtrvdkilvqrhh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3dedB (B:)
mgsshhhhhhssgrenlyfqghdgeedeivqredgswlvdgmvsldrfreffeleaplpg
eaggnihtlagvmlyqlgrvpsvtdrfewngfsfevvdmdrtrvdkilvqrhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dedB (B:)
deivqredgswlvdgmvsldrfreffeleaplpgeaggnihtlagvmlyqlgrvpsvtdr
fewngfsfevvdmdrtrvdkilvqrh

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3dedC (C:)
mgsshhhhhhssgrenlyfqghdgeedeivqredgswlvdgmvsldrfreffeleaplpg
eaggnihtlagvmlyqlgrvpsvtdrfewngfsfevvdmdrtrvdkilvqrhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dedC (C:)
dgeedeivqredgswlvdgmvsldrfreffeleaplpgeaggnihtlagvmlyqlgrvps
vtdrfewngfsfevvdmdrtrvdkilvqrhh

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3dedD (D:)
mgsshhhhhhssgrenlyfqghdgeedeivqredgswlvdgmvsldrfreffeleaplpg
eaggnihtlagvmlyqlgrvpsvtdrfewngfsfevvdmdrtrvdkilvqrhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dedD (D:)
deivqredgswlvdgmvsldrfreffeleaplpgeaggnihtlagvmlyqlgrvpsvtdr
fewngfsfevvdmdrtrvdkilvqrh

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3dedE (E:)
mgsshhhhhhssgrenlyfqghdgeedeivqredgswlvdgmvsldrfreffeleaplpg
eaggnihtlagvmlyqlgrvpsvtdrfewngfsfevvdmdrtrvdkilvqrhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dedE (E:)
deivqredgswlvdgmvsldrfreffeleaplpgeaggnihtlagvmlyqlgrvpsvtdr
fewngfsfevvdmdrtrvdkilvqrhh

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3dedF (F:)
mgsshhhhhhssgrenlyfqghdgeedeivqredgswlvdgmvsldrfreffeleaplpg
eaggnihtlagvmlyqlgrvpsvtdrfewngfsfevvdmdrtrvdkilvqrhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dedF (F:)
deivqredgswlvdgmvsldrfreffeleaplpgeaggnihtlagvmlyqlgrvpsvtdr
fewngfsfevvdmdrtrvdkilvqrh