PDB entry 3dde

View 3dde on RCSB PDB site
Description: crystal structure of a domain of unknown function with a heme oxygenase-like fold (sden_3740) from shewanella denitrificans os217 at 2.30 a resolution
Deposited on 2008-06-05, released 2008-06-24
The last revision was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TENA/THI-4 protein, Domain of Unknown Function with a Heme Oxygenase-like Fold
    Species: Shewanella denitrificans OS217 [TaxId:318161]
    Gene: YP_564736.1, Sden_3740
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: TENA/THI-4 protein, Domain of Unknown Function with a Heme Oxygenase-like Fold
    Species: Shewanella denitrificans OS217 [TaxId:318161]
    Gene: YP_564736.1, Sden_3740
    Database cross-references and differences (RAF-indexed):
  • Heterogens: PEG, NO3, EDO, PGE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3ddeA (A:)
gmsiidltkleqkvatmwdsiltnspfihevldgkatkalyaiymtetyhytkhnaknqa
lvgimgkdlpgkylsfcfhhaheeaghelmalsdiasigfdredvlsskplpatetliay
lywisatgnpvqrlgysywaenvygyidpvlkaiqstldltpqsmkffiahskidakhae
evnemlhevcktqedvdsvvavmenslvltarilddvwkeyqlfqsgasdryaflrdna

    Sequence, based on observed residues (ATOM records):
    >3ddeA (A:)
siidltkleqkvatmwdsiltnspfihevldgkatkalyaiymtetyhytkhnaknqalv
gimgkdlpgkylsfcfhhaheeaghelmalsdiasigfdredvlsskplpatetliayly
wisatgnpvqrlgysywaenvygyidpvlkaiqstldltpqsmkffiahskidakhaeev
nemlhevcktqedvdsvvavmenslvltarilddvwkeyqlfqsgasdryaf

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3ddeB (B:)
gmsiidltkleqkvatmwdsiltnspfihevldgkatkalyaiymtetyhytkhnaknqa
lvgimgkdlpgkylsfcfhhaheeaghelmalsdiasigfdredvlsskplpatetliay
lywisatgnpvqrlgysywaenvygyidpvlkaiqstldltpqsmkffiahskidakhae
evnemlhevcktqedvdsvvavmenslvltarilddvwkeyqlfqsgasdryaflrdna

    Sequence, based on observed residues (ATOM records):
    >3ddeB (B:)
siidltkleqkvatmwdsiltnspfihevldgkatkalyaiymtetyhytkhnaknqalv
gimgkdlpgkylsfcfhhaheeaghelmalsdiasigfdredvlsskplpatetliayly
wisatgnpvqrlgysywaenvygyidpvlkaiqstldltpqsmkffiahskidakhaeev
nemlhevcktqedvdsvvavmenslvltarilddvwkeyqlfqsgasdrya