PDB entry 3dcx

View 3dcx on RCSB PDB site
Description: Crystal structure of a duf1696 family protein with a pleckstrin-homology domain (shew_0819) from shewanella loihica pv-4 at 2.00 A resolution
Class: unknown function
Keywords: Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, unknown function
Deposited on 2008-06-04, released 2008-07-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein of Unknown Function (DUF1696) with Pleckstrin-homology Domains
    Species: Shewanella loihica PV-4 [TaxId:323850]
    Gene: YP_001092950.1, Shew_0819
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3QB43 (1-116)
      • leader sequence (0)
    Domains in SCOPe 2.08: d3dcxa1, d3dcxa2
  • Chain 'B':
    Compound: Protein of Unknown Function (DUF1696) with Pleckstrin-homology Domains
    Species: Shewanella loihica PV-4 [TaxId:323850]
    Gene: YP_001092950.1, Shew_0819
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dcxb_
  • Chain 'C':
    Compound: Protein of Unknown Function (DUF1696) with Pleckstrin-homology Domains
    Species: Shewanella loihica PV-4 [TaxId:323850]
    Gene: YP_001092950.1, Shew_0819
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dcxc_
  • Chain 'D':
    Compound: Protein of Unknown Function (DUF1696) with Pleckstrin-homology Domains
    Species: Shewanella loihica PV-4 [TaxId:323850]
    Gene: YP_001092950.1, Shew_0819
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dcxd_
  • Chain 'E':
    Compound: Protein of Unknown Function (DUF1696) with Pleckstrin-homology Domains
    Species: Shewanella loihica PV-4 [TaxId:323850]
    Gene: YP_001092950.1, Shew_0819
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dcxe_
  • Heterogens: MPD, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3dcxA (A:)
ggnaaevnldelaqelgpimgdneqlalayrvirdmfvftnkrlilidkqgvtgkkvsyh
svpykaithfevetagtfdmdaelklwisgqkdplvkelkkgtdvvgiqktianfsl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3dcxB (B:)
ggnaaevnldelaqelgpimgdneqlalayrvirdmfvftnkrlilidkqgvtgkkvsyh
svpykaithfevetagtfdmdaelklwisgqkdplvkelkkgtdvvgiqktianfsl

    Sequence, based on observed residues (ATOM records): (download) 
    >3dcxB (B:)
aevnldelaqelgpimgdneqlalayrvirdmfvftnkrlilidkqgvtgkkvsyhsvpy
kaithfevetagtfdmdaelklwisgqkdplvkelkkgtdvvgiqktianfsl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3dcxC (C:)
ggnaaevnldelaqelgpimgdneqlalayrvirdmfvftnkrlilidkqgvtgkkvsyh
svpykaithfevetagtfdmdaelklwisgqkdplvkelkkgtdvvgiqktianfsl

    Sequence, based on observed residues (ATOM records): (download) 
    >3dcxC (C:)
naaevnldelaqelgpimgdneqlalayrvirdmfvftnkrlilidkqgvtgkkvsyhsv
pykaithfevetagtfdmdaelklwisgqkdplvkelkkgtdvvgiqktianfsl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3dcxD (D:)
ggnaaevnldelaqelgpimgdneqlalayrvirdmfvftnkrlilidkqgvtgkkvsyh
svpykaithfevetagtfdmdaelklwisgqkdplvkelkkgtdvvgiqktianfsl

    Sequence, based on observed residues (ATOM records): (download) 
    >3dcxD (D:)
aevnldelaqelgpimgdneqlalayrvirdmfvftnkrlilidkqgvtgkkvsyhsvpy
kaithfevetagtfdmdaelklwisgqkdplvkelkkgtdvvgiqktianfsl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3dcxE (E:)
ggnaaevnldelaqelgpimgdneqlalayrvirdmfvftnkrlilidkqgvtgkkvsyh
svpykaithfevetagtfdmdaelklwisgqkdplvkelkkgtdvvgiqktianfsl

    Sequence, based on observed residues (ATOM records): (download) 
    >3dcxE (E:)
evnldelaqelgpimgdneqlalayrvirdmfvftnkrlilidkgkkvsyhsvpykaith
fevetmdaelklwisgqkdplvkelkkgtdvvgiqktianfsl