PDB entry 3dc8

View 3dc8 on RCSB PDB site
Description: Crystal structure of dihydropyrimidinase from Sinorhizobium meliloti
Deposited on 2008-06-03, released 2009-04-21
The last revision was dated 2011-08-10, with a file datestamp of 2011-08-05.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.149
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: dihydropyrimidinase
    Species: Sinorhizobium meliloti [TaxId:382]
    Gene: dhp
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0PQZ5 (Start-483)
      • expression tag (484)
  • Chain 'B':
    Compound: dihydropyrimidinase
    Species: Sinorhizobium meliloti [TaxId:382]
    Gene: dhp
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, ACT, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3dc8A (A:)
mstvikggtivtadltykadvkveggriveigpnlsgaetldatgcyvmpggidphthle
mpfmgtyssddfesgtraalaggttmvvdfalpspgqsllealtmwdnkstrancdysfh
maitwwgeqvfnemetivkdkgintfkhfmaykgalmvdddemfssfqrcaalgalplvh
aengdvvaqlqakllaegnsgpeahaysrpaevegeaanraimiadmagcpvyivhtsce
qaheairrarakgmrvfgepliqhltldeteyfdkdwdhaarrvmsppfrnklhqdslwa
glasgslqvvatdhcaftteqkrfgvgdftripngtggledrmpmlwtygvatgritmne
fvavtstniakilniypkkgailvgadadlvvwdpkrsktisaktqqsaidynvfegktv
tglprftltrgvvsieegtvktqeghgefvrrdpfpavstalstwkevtapravqrsgip
asgvhhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dc8A (A:)
stvikggtivtadltykadvkveggriveigpnlsgaetldatgcyvmpggidphthlem
pfmgtyssddfesgtraalaggttmvvdfalpsgqsllealtmwdnkstrancdysfhma
itwwgeqvfnemetivkdkgintfkhfmaykgalmvdddemfssfqrcaalgalplvhae
ngdvvaqlqakllaegnsgpeahaysrpaevegeaanraimiadmagcpvyivhtsceqa
heairrarakgmrvfgepliqhltldeteyfdkdwdhaarrvmsppfrnklhqdslwagl
asgslqvvatdhcaftteqkrfgvgdftripngtggledrmpmlwtygvatgritmnefv
avtstniakilniypkkgailvgadadlvvwdpkrsktisaktqqsaidynvfegktvtg
lprftltrgvvsieegtvktqeghgefvrrdpfpavstalstwkevtapravqrsgipas
gvh

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3dc8B (B:)
mstvikggtivtadltykadvkveggriveigpnlsgaetldatgcyvmpggidphthle
mpfmgtyssddfesgtraalaggttmvvdfalpspgqsllealtmwdnkstrancdysfh
maitwwgeqvfnemetivkdkgintfkhfmaykgalmvdddemfssfqrcaalgalplvh
aengdvvaqlqakllaegnsgpeahaysrpaevegeaanraimiadmagcpvyivhtsce
qaheairrarakgmrvfgepliqhltldeteyfdkdwdhaarrvmsppfrnklhqdslwa
glasgslqvvatdhcaftteqkrfgvgdftripngtggledrmpmlwtygvatgritmne
fvavtstniakilniypkkgailvgadadlvvwdpkrsktisaktqqsaidynvfegktv
tglprftltrgvvsieegtvktqeghgefvrrdpfpavstalstwkevtapravqrsgip
asgvhhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dc8B (B:)
stvikggtivtadltykadvkveggriveigpnlsgaetldatgcyvmpggidphthlem
pfmgtyssddfesgtraalaggttmvvdfalpsgqsllealtmwdnkstrancdysfhma
itwwgeqvfnemetivkdkgintfkhfmaykgalmvdddemfssfqrcaalgalplvhae
ngdvvaqlqakllaegnsgpeahaysrpaevegeaanraimiadmagcpvyivhtsceqa
heairrarakgmrvfgepliqhltldeteyfdkdwdhaarrvmsppfrnklhqdslwagl
asgslqvvatdhcaftteqkrfgvgdftripngtggledrmpmlwtygvatgritmnefv
avtstniakilniypkkgailvgadadlvvwdpkrsktisaktqqsaidynvfegktvtg
lprftltrgvvsieegtvktqeghgefvrrdpfpavstalstwkevtapravqrs