PDB entry 3dc6
View 3dc6 on RCSB PDB site
Description: Crystal Structure of a manganese superoxide dismutases from Caenorhabditis elegans
Class: oxidoreductase
Keywords: alpha hairpin N domain, alpha/beta C domain, OXIDOREDUCTASE, Manganese, Metal-binding, Mitochondrion, Transit peptide
Deposited on
2008-06-03, released
2009-06-09
The last revision prior to the SCOPe 2.05 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.171
AEROSPACI score: 0.53
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Superoxide dismutase [Mn] 1
Species: Caenorhabditis elegans [TaxId:6239]
Gene: sod-2, sdm-1, F10D11.1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3dc6a1, d3dc6a2 - Chain 'C':
Compound: Superoxide dismutase [Mn] 1
Species: Caenorhabditis elegans [TaxId:6239]
Gene: sod-2, sdm-1, F10D11.1
Database cross-references and differences (RAF-indexed):
- Uniprot P31161 (1-197)
- initiating methionine (0)
Domains in SCOPe 2.05: d3dc6c1, d3dc6c2 - Heterogens: MN, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3dc6A (A:)
mkhslpdlpydyadlepvisheimqlhhqkhhatyvnnlnqieeklheavskgnvkeaia
lqpalkfnggghinhsifwtnlakdggepsaelltaiksdfgsldnlqkqlsastvavqg
sgwgwlgycpkgkilkvatcanqdpleattglvplfgidvwehayylqyknvrpdyvnai
wkianwknvserfakaqq
Sequence, based on observed residues (ATOM records): (download)
>3dc6A (A:)
khslpdlpydyadlepvisheimqlhhqkhhatyvnnlnqieeklheavskgnvkeaial
qpalkfnggghinhsifwtnlakdggepsaelltaiksdfgsldnlqkqlsastvavqgs
gwgwlgycpkgkilkvatcanqdpleattglvplfgidvwehayylqyknvrpdyvnaiw
kianwknvserfakaqq
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>3dc6C (C:)
mkhslpdlpydyadlepvisheimqlhhqkhhatyvnnlnqieeklheavskgnvkeaia
lqpalkfnggghinhsifwtnlakdggepsaelltaiksdfgsldnlqkqlsastvavqg
sgwgwlgycpkgkilkvatcanqdpleattglvplfgidvwehayylqyknvrpdyvnai
wkianwknvserfakaqq