PDB entry 3dba

View 3dba on RCSB PDB site
Description: Crystal structure of the cGMP-bound GAF a domain from the photoreceptor phosphodiesterase 6C
Deposited on 2008-05-30, released 2008-07-01
The last revision was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.57 Å
R-factor: 0.222
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha'
    Species: Gallus gallus [TaxId:9031]
    Gene: PDE6C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P52731 (1-171)
      • see remark 999 (39)
  • Chain 'B':
    Compound: Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha'
    Species: Gallus gallus [TaxId:9031]
    Gene: PDE6C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P52731 (1-171)
      • see remark 999 (39)
  • Heterogens: 35G, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3dbaA (A:)
mrleecnilfellteiqdeagsmekivhktlqrlsqllaadrcsmficrsrngipevatr
llnvtptskfednlvnpdketvfpldigiagwvahtkkffnipdvkknnhfsdyldkktg
yttvnmmaipitqgkevlavvmalnklnasefskedeevfkkylnfislvlrlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dbaA (A:)
rleecnilfellteiqdeagsmekivhktlqrlsqllaadrcsmficrsrngipevatrl
lnvtptskfednlvnpdketvfpldigiagwvahtkkffnipdvkknnhfsdyldkktgy
ttvnmmaipitqgkevlavvmalnklnasefskedeevfkkylnfislvlr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3dbaB (B:)
mrleecnilfellteiqdeagsmekivhktlqrlsqllaadrcsmficrsrngipevatr
llnvtptskfednlvnpdketvfpldigiagwvahtkkffnipdvkknnhfsdyldkktg
yttvnmmaipitqgkevlavvmalnklnasefskedeevfkkylnfislvlrlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dbaB (B:)
rleecnilfellteiqdeagsmekivhktlqrlsqllaadrcsmficrsrngipevatrl
lnvtptskfednlvnpdketvfpldigiagwvahtkkffnipdvkknnhfsdyldkktgy
ttvnmmaipitqgkevlavvmalnklnasefskedeevfkkylnfislvlr