PDB entry 3daq

View 3daq on RCSB PDB site
Description: Crystal structure of dihydrodipicolinate synthase from methicillin-resistant Staphylococcus aureus
Class: lyase
Keywords: dihydrodipicolinate synthase, lysine biosynthesis, Amino-acid biosynthesis, Diaminopimelate biosynthesis, Lyase, Schiff base
Deposited on 2008-05-29, released 2008-08-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.45 Å
R-factor: 0.134
AEROSPACI score: 0.7 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Dihydrodipicolinate synthase
    Species: Staphylococcus aureus [TaxId:282458]
    Gene: dapA, SAR1407
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3daqa_
  • Chain 'B':
    Compound: Dihydrodipicolinate synthase
    Species: Staphylococcus aureus [TaxId:282458]
    Gene: dapA, SAR1407
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3daqb_
  • Chain 'C':
    Compound: Dihydrodipicolinate synthase
    Species: Staphylococcus aureus [TaxId:282458]
    Gene: dapA, SAR1407
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3daqc_
  • Chain 'D':
    Compound: Dihydrodipicolinate synthase
    Species: Staphylococcus aureus [TaxId:282458]
    Gene: dapA, SAR1407
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3daqd_
  • Heterogens: CL, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3daqA (A:)
thlfegvgvalttpftnnkvnlealkahvnfllennaqaiivngttaesptlttdekeli
lktvidlvdkrvpviagtgtndteksiqasiqakalgadaimlitpyynktnqrglvkhf
eaiadavklpvvlynvpsrtnmtiepetveilsqhpyivalkdatndfeyleevkkridt
nsfalysgnddnvveyyqrggqgvisvianvipkefqalydaqqsgldiqdqfkpigtll
salsvdinpipikaltsylgfgnyelrlplvsledtdtkvlreaydtfkage

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3daqB (B:)
thlfegvgvalttpftnnkvnlealkahvnfllennaqaiivngttaesptlttdekeli
lktvidlvdkrvpviagtgtndteksiqasiqakalgadaimlitpyynktnqrglvkhf
eaiadavklpvvlynvpsrtnmtiepetveilsqhpyivalkdatndfeyleevkkridt
nsfalysgnddnvveyyqrggqgvisvianvipkefqalydaqqsgldiqdqfkpigtll
salsvdinpipikaltsylgfgnyelrlplvsledtdtkvlreaydtfkage

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3daqC (C:)
thlfegvgvalttpftnnkvnlealkahvnfllennaqaiivngttaesptlttdekeli
lktvidlvdkrvpviagtgtndteksiqasiqakalgadaimlitpyynktnqrglvkhf
eaiadavklpvvlynvpsrtnmtiepetveilsqhpyivalkdatndfeyleevkkridt
nsfalysgnddnvveyyqrggqgvisvianvipkefqalydaqqsgldiqdqfkpigtll
salsvdinpipikaltsylgfgnyelrlplvsledtdtkvlreaydtfkage

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3daqD (D:)
thlfegvgvalttpftnnkvnlealkahvnfllennaqaiivngttaesptlttdekeli
lktvidlvdkrvpviagtgtndteksiqasiqakalgadaimlitpyynktnqrglvkhf
eaiadavklpvvlynvpsrtnmtiepetveilsqhpyivalkdatndfeyleevkkridt
nsfalysgnddnvveyyqrggqgvisvianvipkefqalydaqqsgldiqdqfkpigtll
salsvdinpipikaltsylgfgnyelrlplvsledtdtkvlreaydtfkage