PDB entry 3dap

View 3dap on RCSB PDB site
Description: c. glutamicum dap dehydrogenase in complex with nadp+ and the inhibitor 5s-isoxazoline
Class: oxidoreductase
Keywords: oxidoreductase, nadp, dehydrogenase, d-amino acid dehydrogenase, lysine biosynthesis, asymmetric dimer, inhibitor
Deposited on 1997-12-29, released 1998-04-08
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.175
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: diaminopimelic acid dehydrogenase
    Species: Corynebacterium glutamicum [TaxId:1718]
    Gene: DAPDH
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3dapa1, d3dapa2
  • Chain 'B':
    Compound: diaminopimelic acid dehydrogenase
    Species: Corynebacterium glutamicum [TaxId:1718]
    Gene: DAPDH
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3dapb1, d3dapb2
  • Heterogens: NDP, DA3, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3dapA (A:)
mtnirvaivgygnlgrsvekliakqpdmdlvgifsrratldtktpvfdvadvdkhaddvd
vlflcmgsatdipeqapkfaqfactvdtydnhrdiprhrqvmneaataagnvalvstgwd
pgmfsinrvyaaavlaehqqhtfwgpglsqghsdalrripgvqkavqytlpsedalekar
rgeagdltgkqthkrqcfvvadaadheriendirtmpdyfvgyevevnfideatfdseht
gmphgghvittgdtggfnhtveyilkldrnpdftassqiafgraahrmkqqgqsgaftvl
evapyllspenlddliardv

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3dapB (B:)
mtnirvaivgygnlgrsvekliakqpdmdlvgifsrratldtktpvfdvadvdkhaddvd
vlflcmgsatdipeqapkfaqfactvdtydnhrdiprhrqvmneaataagnvalvstgwd
pgmfsinrvyaaavlaehqqhtfwgpglsqghsdalrripgvqkavqytlpsedalekar
rgeagdltgkqthkrqcfvvadaadheriendirtmpdyfvgyevevnfideatfdseht
gmphgghvittgdtggfnhtveyilkldrnpdftassqiafgraahrmkqqgqsgaftvl
evapyllspenlddliardv