PDB entry 3d8f

View 3d8f on RCSB PDB site
Description: Crystal structure of the human Fe65-PTB1 domain with bound phosphate (trigonal crystal form)
Deposited on 2008-05-23, released 2008-06-10
The last revision was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.245
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Amyloid beta A4 precursor protein-binding family B member 1
    Species: Homo sapiens [TaxId:9606]
    Gene: APBB1, FE65, RIR
    Database cross-references and differences (RAF-indexed):
    • Uniprot O00213 (0-139)
      • expression tag (140-141)
  • Chain 'B':
    Compound: Amyloid beta A4 precursor protein-binding family B member 1
    Species: Homo sapiens [TaxId:9606]
    Gene: APBB1, FE65, RIR
    Database cross-references and differences (RAF-indexed):
    • Uniprot O00213 (0-139)
      • expression tag (140-142)
  • Chain 'C':
    Compound: Amyloid beta A4 precursor protein-binding family B member 1
    Species: Homo sapiens [TaxId:9606]
    Gene: APBB1, FE65, RIR
    Database cross-references and differences (RAF-indexed):
    • Uniprot O00213 (0-139)
      • expression tag (140-141)
  • Chain 'D':
    Compound: Amyloid beta A4 precursor protein-binding family B member 1
    Species: Homo sapiens [TaxId:9606]
    Gene: APBB1, FE65, RIR
    Database cross-references and differences (RAF-indexed):
    • Uniprot O00213 (0-139)
      • expression tag (140-141)
  • Heterogens: PO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3d8fA (A:)
gikcfavrslgwvemteeelapgrssvavnncirqlsyhknnlhdpmsggwgegkdlllq
ledetlklvepqsqallhaqpiisirvwgvgrdsgrerdfayvardkltqmlkchvfrce
apakniatslheicskimaelehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3d8fA (A:)
gikcfavrslgwvemteeelapgrssvavnncirqlsyhkdlllqledetlklvepqsqa
llhaqpiisirvwgvgrdsgrerdfayvardkltqmlkchvfrceapakniatslheics
kimaele

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3d8fB (B:)
gikcfavrslgwvemteeelapgrssvavnncirqlsyhknnlhdpmsggwgegkdlllq
ledetlklvepqsqallhaqpiisirvwgvgrdsgrerdfayvardkltqmlkchvfrce
apakniatslheicskimaelehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3d8fB (B:)
gikcfavrslgwvemteeelapgrssvavnncirqlsgwgegkdlllqledetlklvepq
sqallhaqpiisirvwgvgerdfayvardkltqmlkchvfrceapakniatslheicski
maeleh

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3d8fC (C:)
gikcfavrslgwvemteeelapgrssvavnncirqlsyhknnlhdpmsggwgegkdlllq
ledetlklvepqsqallhaqpiisirvwgvgrdsgrerdfayvardkltqmlkchvfrce
apakniatslheicskimaelehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3d8fC (C:)
gikcfavrslgwvemteeelapgrssvavnncirqlsyhkdlllqledetlklvepqsqa
llhaqpiisirvwgvgrdsgrerdfayvardkltqmlkchvfrceapakniatslheics
kimaele

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3d8fD (D:)
gikcfavrslgwvemteeelapgrssvavnncirqlsyhknnlhdpmsggwgegkdlllq
ledetlklvepqsqallhaqpiisirvwgvgrdsgrerdfayvardkltqmlkchvfrce
apakniatslheicskimaelehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3d8fD (D:)
gikcfavrslgwvemteeelapgrssvavnncirqlsgwgegkdlllqledetlklvepq
sqallhaqpiisirvwgvgerdfayvardkltqmlkchvfrceapakniatslheicski
maele