PDB entry 3d8e

View 3d8e on RCSB PDB site
Description: Crystal structure of the human Fe65-PTB1 domain (trigonal crystal form)
Deposited on 2008-05-23, released 2008-06-10
The last revision was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.246
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Amyloid beta A4 precursor protein-binding family B member 1
    Species: Homo sapiens [TaxId:9606]
    Gene: APBB1, FE65, RIR
    Database cross-references and differences (RAF-indexed):
    • Uniprot O00213 (Start-139)
      • expression tag (140-141)
  • Chain 'B':
    Compound: Amyloid beta A4 precursor protein-binding family B member 1
    Species: Homo sapiens [TaxId:9606]
    Gene: APBB1, FE65, RIR
    Database cross-references and differences (RAF-indexed):
    • Uniprot O00213 (0-139)
      • expression tag (140-141)
  • Chain 'C':
    Compound: Amyloid beta A4 precursor protein-binding family B member 1
    Species: Homo sapiens [TaxId:9606]
    Gene: APBB1, FE65, RIR
    Database cross-references and differences (RAF-indexed):
    • Uniprot O00213 (Start-139)
      • expression tag (140-141)
  • Chain 'D':
    Compound: Amyloid beta A4 precursor protein-binding family B member 1
    Species: Homo sapiens [TaxId:9606]
    Gene: APBB1, FE65, RIR
    Database cross-references and differences (RAF-indexed):
    • Uniprot O00213 (0-139)
      • expression tag (140-141)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3d8eA (A:)
gikcfavrslgwvemteeelapgrssvavnncirqlsyhknnlhdpmsggwgegkdlllq
ledetlklvepqsqallhaqpiisirvwgvgrdsgrerdfayvardkltqmlkchvfrce
apakniatslheicskimaelehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3d8eA (A:)
kcfavrslgwvemteeelapgrssvavnncirqlsykdlllqledetlklvepqsqallh
aqpiisirvwgvgdsgrerdfayvardkltqmlkchvfrceapakniatslheicskima
ele

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3d8eB (B:)
gikcfavrslgwvemteeelapgrssvavnncirqlsyhknnlhdpmsggwgegkdlllq
ledetlklvepqsqallhaqpiisirvwgvgrdsgrerdfayvardkltqmlkchvfrce
apakniatslheicskimaelehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3d8eB (B:)
gikcfavrslgwvemteeelapgrssvavnncirqgkdlllqledetlklvepqsqallh
aqpiisirvwgvgrdrerdfayvardtqmlkchvfrceapakniatslheicskimaele

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3d8eC (C:)
gikcfavrslgwvemteeelapgrssvavnncirqlsyhknnlhdpmsggwgegkdlllq
ledetlklvepqsqallhaqpiisirvwgvgrdsgrerdfayvardkltqmlkchvfrce
apakniatslheicskimaelehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3d8eC (C:)
kcfavrslgwvemteeelapgrssvavnncirqlsydlllqledetlklvepqsqallha
qpiisirvwgvgdsgrerdfayvardkltqmlkchvfrceapakniatslheicskimae
le

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3d8eD (D:)
gikcfavrslgwvemteeelapgrssvavnncirqlsyhknnlhdpmsggwgegkdlllq
ledetlklvepqsqallhaqpiisirvwgvgrdsgrerdfayvardkltqmlkchvfrce
apakniatslheicskimaelehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3d8eD (D:)
gikcfavrslgwvemteeelapgrssvavnncirqlgkdlllqledetlklvepqsqall
haqpiisirvwgvgrdrerdfayvardltqmlkchvfrceapakniatslheicskimae
le