PDB entry 3d7k

View 3d7k on RCSB PDB site
Description: Crystal structure of benzaldehyde lyase in complex with the inhibitor MBP
Deposited on 2008-05-21, released 2008-07-01
The last revision was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.49 Å
R-factor: 0.2
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: benzaldehyde lyase
    Species: PSEUDOMONAS FLUORESCENS
    Gene: bznB
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: benzaldehyde lyase
    Species: PSEUDOMONAS FLUORESCENS
    Gene: bznB
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CA, D7K, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3d7kA (A:)
    mamitggelvvrtlikagvehlfglhgahidtifqacldhdvpiidtrheaaaghaaegy
    aragaklgvalvtagggftnavtpianawldrtpvlfltgsgalrddetntlqagidqva
    maapitkwahrvmatehiprlvmqairaalsaprgpvlldlpwdilmnqidedsviipdl
    vlsahgarpdpadldqalallrkaerpvivlgseasrtarktalsafvaatgvpvfadye
    glsmlsglpdamrgglvqnlysfakadaapdlvlmlgarfglntghgsgqliphsaqviq
    vdpdacelgrlqgialgivadvggtiealaqataqdaawpdrgdwcakvtdlaqeryasi
    aaksssehalhpfhasqviakhvdagvtvvadgaltylwlsevmsrvkpggflchgylgs
    mgvgfgtalgaqvadleagrrtilvtgdgsvgysigefdtlvrkqlpliviimnnqswga
    tlhfqqlavgpnrvtgtrlengsyhgvaaafgadgyhvdsvesfsaalaqalahnrpaci
    nvavaldpippeeliligmdpfgshhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >3d7kA (A:)
    amitggelvvrtlikagvehlfglhgahidtifqacldhdvpiidtrheaaaghaaegya
    ragaklgvalvtagggftnavtpianawldrtpvlfltgsgalrddetntlqagidqvam
    aapitkwahrvmatehiprlvmqairaalsaprgpvlldlpwdilmnqidedsviipdlv
    lsahgarpdpadldqalallrkaerpvivlgseasrtarktalsafvaatgvpvfadyeg
    lsmlsglpdamrgglvqnlysfakadaapdlvlmlgarfglntghgsgqliphsaqviqv
    dpdacelgrlqgialgivadvggtiealaqataqdaawpdrgdwcakvtdlaqeryasia
    aksssehalhpfhasqviakhvdagvtvvadgaltylwlsevmsrvkpggflchgylgsm
    gvgfgtalgaqvadleagrrtilvtgdgsvgysigefdtlvrkqlpliviimnnqswgat
    lhfqqlavgpnrvtgtrlengsyhgvaaafgadgyhvdsvesfsaalaqalahnrpacin
    vavaldpippeeli
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3d7kB (B:)
    mamitggelvvrtlikagvehlfglhgahidtifqacldhdvpiidtrheaaaghaaegy
    aragaklgvalvtagggftnavtpianawldrtpvlfltgsgalrddetntlqagidqva
    maapitkwahrvmatehiprlvmqairaalsaprgpvlldlpwdilmnqidedsviipdl
    vlsahgarpdpadldqalallrkaerpvivlgseasrtarktalsafvaatgvpvfadye
    glsmlsglpdamrgglvqnlysfakadaapdlvlmlgarfglntghgsgqliphsaqviq
    vdpdacelgrlqgialgivadvggtiealaqataqdaawpdrgdwcakvtdlaqeryasi
    aaksssehalhpfhasqviakhvdagvtvvadgaltylwlsevmsrvkpggflchgylgs
    mgvgfgtalgaqvadleagrrtilvtgdgsvgysigefdtlvrkqlpliviimnnqswga
    tlhfqqlavgpnrvtgtrlengsyhgvaaafgadgyhvdsvesfsaalaqalahnrpaci
    nvavaldpippeeliligmdpfgshhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >3d7kB (B:)
    amitggelvvrtlikagvehlfglhgahidtifqacldhdvpiidtrheaaaghaaegya
    ragaklgvalvtagggftnavtpianawldrtpvlfltgsgalrddetntlqagidqvam
    aapitkwahrvmatehiprlvmqairaalsaprgpvlldlpwdilmnqidedsviipdlv
    lsahgarpdpadldqalallrkaerpvivlgseasrtarktalsafvaatgvpvfadyeg
    lsmlsglpdamrgglvqnlysfakadaapdlvlmlgarfglntghgsgqliphsaqviqv
    dpdacelgrlqgialgivadvggtiealaqataqdaawpdrgdwcakvtdlaqeryasia
    aksssehalhpfhasqviakhvdagvtvvadgaltylwlsevmsrvkpggflchgylgsm
    gvgfgtalgaqvadleagrrtilvtgdgsvgysigefdtlvrkqlpliviimnnqswgat
    lhfqqlavgpnrvtgtrlengsyhgvaaafgadgyhvdsvesfsaalaqalahnrpacin
    vavaldpippeeli