PDB entry 3d6z

View 3d6z on RCSB PDB site
Description: Crystal structure of R275E mutant of BMRR bound to DNA and rhodamine
Class: transcription regulator/DNA
Keywords: MULTIDRUG RESISTANCE, TRANSCRIPTION REGULATION, PROTEIN-DNA COMPLEX, Activator, DNA-binding, TRANSCRIPTION REGULATOR-DNA COMPLEX
Deposited on 2008-05-20, released 2008-08-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Multidrug-efflux transporter 1 regulator
    Species: Bacillus subtilis [TaxId:1423]
    Gene: bmrR, bmr1R
    Database cross-references and differences (RAF-indexed):
    • Uniprot P39075 (Start-277)
      • engineered (274)
      • engineered (276-277)
    Domains in SCOPe 2.08: d3d6za1, d3d6za2
  • Chain 'B':
    Compound: BMR promoter DNA
    Species: synthetic construct, synthetic [TaxId:32630]
  • Heterogens: GOL, RHQ, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3d6zA (A:)
mkesyysigevsklanvsikalryydkidlfkpayvdpdtsyryytdsqlihldlikslk
yigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypa
lgevfvldeeeiriiqteaegigpenvlnasysklkkfiesadgftnnsygatfsfqpyt
sidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyi
adrqltvvsdvyeliipihyspkkqeeyrvemkieildhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3d6zA (A:)
kesyysigevsklanvsikalryydkidlfkpayvdpdtsyryytdsqlihldlikslky
igtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypal
gevfvldeeeiriiqteaegigpenvlnasysklkkfiesadgftnnsygatfsfqpyts
idemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyia
drqltvvsdvyeliipihyspkkqeeyrvemkieild

  • Chain 'B':
    No sequence available.