PDB entry 3d69

View 3d69 on RCSB PDB site
Description: Crystal Structure of the Fab Fragment of an Anti-Factor IX Antibody 10C12
Deposited on 2008-05-19, released 2009-03-31
The last revision was dated 2014-12-10, with a file datestamp of 2014-12-05.
Experiment type: XRAY
Resolution: 3.77 Å
R-factor: 0.249
AEROSPACI score: 0.05 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: anti-factor IX antibody, 10C12
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3D69
  • Chain 'B':
    Compound: anti-factor IX antibody, 10C12
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3D69 (0-223)
  • Chain 'H':
    Compound: anti-factor IX antibody, 10C12
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3D69 (0-223)
  • Chain 'L':
    Compound: anti-factor IX antibody, 10C12
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3D69

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3d69A (A:)
qsvltqppsvsaapgqkvtiscsgstsnignnyvswyqqhpgkapklmiydvskrpsgvp
drfsgsksgnsasldisglqsedeadyycaawddslseflfgtgtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshksyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records):
    >3d69A (A:)
vltqppsvsaapgqkvtiscsgstsnignnyvswyqqhpgkapklmiydvskrpsgvpdr
fsgsksgnsasldisglqsedeadyycaawddslseflfgtgtkltvlgqpkaapsvtlf
ppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassyl
sltpeqwkshksyscqvthegstvektvapt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3d69B (B:)
gvqlvesgggvvqpgrslrlscaasgftfstyamhwvrqapgkglewvaiisydgskkyy
adsvkgrftisrdnskntlylqmnslraedtavyycarasiaaarvldywgrgtmvtvss
astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd

    Sequence, based on observed residues (ATOM records):
    >3d69B (B:)
gvqlvesgggvvqpgrslrlscaasgftfstyamhwvrqapgkglewvaiisydgskkyy
adsvkgrftisrdnskntlylqmnslraedtavyycarasiaaarvldywgrgtmvtvss
astkgpsvfplapsgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysls
svvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd

  • Chain 'H':
    Sequence, based on SEQRES records:
    >3d69H (H:)
gvqlvesgggvvqpgrslrlscaasgftfstyamhwvrqapgkglewvaiisydgskkyy
adsvkgrftisrdnskntlylqmnslraedtavyycarasiaaarvldywgrgtmvtvss
astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd

    Sequence, based on observed residues (ATOM records):
    >3d69H (H:)
gvqlvesgggvvqpgrslrlscaasgftfstyamhwvrqapgkglewvaiisydgskkyy
adsvkgrftisrdnskntlylqmnslraedtavyycarasiaaarvldywgrgtmvtvss
astkgpsvfplapsgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysls
svvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd

  • Chain 'L':
    Sequence, based on SEQRES records:
    >3d69L (L:)
qsvltqppsvsaapgqkvtiscsgstsnignnyvswyqqhpgkapklmiydvskrpsgvp
drfsgsksgnsasldisglqsedeadyycaawddslseflfgtgtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshksyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records):
    >3d69L (L:)
vltqppsvsaapgqkvtiscsgstsnignnyvswyqqhpgkapklmiydvskrpsgvpdr
fsgsksgnsasldisglqsedeadyycaawddslseflfgtgtkltvlgqpkaapsvtlf
ppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassyl
sltpeqwkshksyscqvthegstvektvapt