PDB entry 3d5e

View 3d5e on RCSB PDB site
Description: Crystal structure of human plasma platelet activating factor acetylhydrolase covalently inhibited by paraoxon
Deposited on 2008-05-16, released 2008-09-09
The last revision was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.207
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: platelet-activating factor acetylhydrolase
    Species: Homo sapiens [TaxId:9606]
    Gene: PLA2G7, PAFAH
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: platelet-activating factor acetylhydrolase
    Species: Homo sapiens [TaxId:9606]
    Gene: PLA2G7, PAFAH
    Database cross-references and differences (RAF-indexed):
  • Heterogens: DEP, FMT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3d5eA (A:)
aaasfgqtkiprgngpysvgctdlmfdhtnkgtflrlyypsqdndrldtlwipnkeyfwg
lskflgthwlmgnilrllfgsmttpanwnsplrpgekyplvvfshglgafrtlysaigid
lashgfivaavehrdrsasatyyfkdqsaaeigdkswlylrtlkqeeethirneqvrqra
kecsqalslildidhgkpvknaldlkfdmeqlkdsidrekiavighsfggatviqtlsed
qrfrcgialdawmfplgdevysripqplffinseyfqypaniikmkkcyspdkerkmiti
rgsvhqnfadftfatgkiighmlklkgdidsnvaidlsnkaslaflqkhlglhkdfdqwd
cliegddenlipgtninttnqhi

    Sequence, based on observed residues (ATOM records):
    >3d5eA (A:)
tkiprgngpysvgctdlmfdhtnkgtflrlyypsqdndrldtlwipnkeyfwglskflgt
hwlmgnilrllfgsmttpanwnsplrpgekyplvvfshglgafrtlysaigidlashgfi
vaavehrdrsasatyyfkdqsaaeigdkswlylrtlkqeeethirneqvrqrakecsqal
slildidhgkpvknaldlkfdmeqlkdsidrekiavighsfggatviqtlsedqrfrcgi
aldawmfplgdevysripqplffinseyfqypaniikmkkcyspdkerkmitirgsvhqn
fadftfatgkiighmlklkgdidsnvaidlsnkaslaflqkhlglhkdfdqwdcliegdd
enlipgtninttn

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3d5eB (B:)
aaasfgqtkiprgngpysvgctdlmfdhtnkgtflrlyypsqdndrldtlwipnkeyfwg
lskflgthwlmgnilrllfgsmttpanwnsplrpgekyplvvfshglgafrtlysaigid
lashgfivaavehrdrsasatyyfkdqsaaeigdkswlylrtlkqeeethirneqvrqra
kecsqalslildidhgkpvknaldlkfdmeqlkdsidrekiavighsfggatviqtlsed
qrfrcgialdawmfplgdevysripqplffinseyfqypaniikmkkcyspdkerkmiti
rgsvhqnfadftfatgkiighmlklkgdidsnvaidlsnkaslaflqkhlglhkdfdqwd
cliegddenlipgtninttnqhi

    Sequence, based on observed residues (ATOM records):
    >3d5eB (B:)
tkiprgngpysvgctdlmfdhtnkgtflrlyypsqdndrldtlwipnkeyfwglskflgt
hwlmgnilrllfgsmttpanwnsplrpgekyplvvfshglgafrtlysaigidlashgfi
vaavehrdrsasatyyfkdqsaaeigdkswlylrtlkqeeethirneqvrqrakecsqal
slildidhgkpvknaldlkfdmeqlkdsidrekiavighsfggatviqtlsedqrfrcgi
aldawmfplgdevysripqplffinseyfqypaniikmkkcyspdkerkmitirgsvhqn
fadftfatgkiighmlklkgdidsnvaidlsnkaslaflqkhlglhkdfdqwdcliegdd
enlipgtnin