PDB entry 3d4b
View 3d4b on RCSB PDB site
Description: Crystal structure of Sir2Tm in complex with Acetyl p53 peptide and DADMe-NAD+
Class: hydrolase
Keywords: Rossmann Fold, Cytoplasm, Hydrolase, Metal-binding, NAD, Zinc
Deposited on
2008-05-14, released
2008-09-30
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.197
AEROSPACI score: 0.47
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: NAD-dependent deacetylase
Species: Thermotoga maritima [TaxId:2336]
Gene: npdA, TM_0490
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3d4ba_ - Chain 'D':
Compound: Acetyl P53 peptide
Database cross-references and differences (RAF-indexed):
- Heterogens: ZN, DZD, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3d4bA (A:)
mkmkefldllnesrltvtltgagistpsgipdfrgpngiykkysqnvfdidffyshpeef
yrfakegifpmlqakpnlahvllakleekglieavitqnidrlhqragskkvielhgnve
eyycvrcekkytvedvikklessdvplcddcnslirpnivffgenlpqdalreaiglssr
aslmivlgsslvvypaaelplitvrsggklvivnlgetpfddiatlkynmdvvefarrvm
eeggis
Sequence, based on observed residues (ATOM records): (download)
>3d4bA (A:)
mkmkefldllnesrltvtltgagistpsgipdfnvfdidffyshpeefyrfakegifpml
qakpnlahvllakleekglieavitqnidrlhqragskkvielhgnveeyycvrcekkyt
vedvikklessdvplcddcnslirpnivffgenlpqdalreaiglssraslmivlgsslv
vypaaelplitvrsggklvivnlgetpfddiatlkynmdvvefarrvmeeggi
- Chain 'D':
No sequence available.