PDB entry 3d2w

View 3d2w on RCSB PDB site
Description: Crystal structure of mouse TDP-43 RRM2 domain in complex with DNA
Class: DNA/RNA binding protein
Keywords: DP-43 proteinopathy, TDP-43 inclusions, RNA recognition motif, FTLD-U, ALS, RRM, DNA-RNA BINDING PROTEIN COMPLEX
Deposited on 2008-05-09, released 2009-04-07
The last revision prior to the SCOPe 2.01 freeze date was dated 2010-05-12, with a file datestamp of 2010-05-07.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.21
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: TAR DNA-binding protein 43
  Species: Mus musculus [TaxId:10090]
  Gene: Tardbp, Tdp43
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q921F2 (12-End)
    • expression tag (10-11)
  Domains in SCOPe 2.01: d3d2wa_
• Chain 'B':
  Compound: DNA (5'-d(*dgp*dtp*dtp*dgp*dap*dgp*dcp*dgp*dtp*dt)-3')
  Species: synthetic, synthetic
  
• Heterogens: PO4, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >3d2wA (A:)
  mrgshhhhhhgskvfvgrctedmtaeelqqffcqygevvdvfipkpfrafafvtfaddkv
  aqslcgedliikgisvhisnaepkhnkln
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >3d2wA (A:)
  gskvfvgrctedmtaeelqqffcqygevvdvfipkpfrafafvtfaddkvaqslcgedli
  ikgisvhisnae
  

  
  
• Chain 'B':
  No sequence available.