PDB entry 3d2o

View 3d2o on RCSB PDB site
Description: crystal structure of manganese-metallated gtp cyclohydrolase type ib
Deposited on 2008-05-08, released 2009-05-12
The last revision was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 2.04 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: UPF0343 protein NGO0387
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Gene: ngo0387
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: UPF0343 protein NGO0387
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Gene: ngo0387
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MN, LI, CL, AZI, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3d2oA (A:)
    mnaiadvqssrdlrnlpinqvgikdlrfpitlktaegtqstvarltmtvylpaeqkgthm
    srfvalmeqhtevldfaqlhrltaemvalldsragkisvsfpffrkktapvsgirslldy
    dvsltgemkdgayghsmkvmipvtslcpcskeisqygahnqrshvtvsltsdaevgieev
    idyvetqascqlygllkrpdekyvtekayenpkfvedmvrdvatsliadkriksfvvese
    nfesihnhsayayiayp
    

    Sequence, based on observed residues (ATOM records):
    >3d2oA (A:)
    rnlpinqvgikdlrfpitlktaegtqstvarltmtvylpaeqkgthmsrfvalmeqhtev
    ldfaqlhrltaemvalldsragkisvsfpffrkktapvsgirslldydvsltgemkdgay
    ghsmkvmipvtslcpcskeisqygahnqrshvtvsltsdaevgieevidyvetqascqly
    gllkrpdekyvtekayenpkfvedmvrdvatsliadkriksfvvesenfesihnhsayay
    iayp
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3d2oB (B:)
    mnaiadvqssrdlrnlpinqvgikdlrfpitlktaegtqstvarltmtvylpaeqkgthm
    srfvalmeqhtevldfaqlhrltaemvalldsragkisvsfpffrkktapvsgirslldy
    dvsltgemkdgayghsmkvmipvtslcpcskeisqygahnqrshvtvsltsdaevgieev
    idyvetqascqlygllkrpdekyvtekayenpkfvedmvrdvatsliadkriksfvvese
    nfesihnhsayayiayp
    

    Sequence, based on observed residues (ATOM records):
    >3d2oB (B:)
    nlpinqvgikdlrfpitlktaegtqstvarltmtvylpaeqkgthmsrfvalmeqhtevl
    dfaqlhrltaemvalldsragkisvsfpffrkktapvsgirslldydvsltgemkdgayg
    hsmkvmipvtslcpcskeisqygahnqrshvtvsltsdaevgieevidyvetqascqlyg
    llkrpdekyvtekayenpkfvedmvrdvatsliadkriksfvvesenfesihnhsayayi
    ayp