PDB entry 3cz3

View 3cz3 on RCSB PDB site
Description: crystal structure of tomato aspermy virus 2b in complex with sirna
Deposited on 2008-04-27, released 2009-05-05
The last revision was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 3.23 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein 2b
    Species: Tomato aspermy virus [TaxId:12315]
    Gene: RNA2
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Protein 2b
    Species: Tomato aspermy virus [TaxId:12315]
    Gene: RNA2
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Protein 2b
    Species: Tomato aspermy virus [TaxId:12315]
    Gene: RNA2
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Protein 2b
    Species: Tomato aspermy virus [TaxId:12315]
    Gene: RNA2
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: RNA (5'-r(p*cp*gp*up*ap*cp*gp*cp*gp*gp*ap*ap*up*ap*cp*up*up*cp*gp*a)-3')
  • Chain 'F':
    Compound: RNA (5'-r(p*up*cp*gp*ap*ap*gp*up*ap*up*up*cp*cp*gp*cp*gp*up*ap*cp*g)-3')
  • Chain 'G':
    Compound: RNA (5'-r(p*cp*gp*up*ap*cp*gp*cp*gp*gp*ap*ap*up*ap*cp*up*up*cp*gp*a)-3')
  • Chain 'H':
    Compound: RNA (5'-r(p*up*cp*gp*ap*ap*gp*up*ap*up*up*cp*cp*gp*cp*gp*up*ap*cp*g)-3')

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3cz3A (A:)
smasieiplheiirklermnqkkqaqrkrhklnrkerghkspseqrrselwharqvelsa
insdnssdeg

    Sequence, based on observed residues (ATOM records):
    >3cz3A (A:)
sieiplheiirklermnqkkqaqrkrhklnrkerghkspseqrrselwharqvels

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3cz3B (B:)
smasieiplheiirklermnqkkqaqrkrhklnrkerghkspseqrrselwharqvelsa
insdnssdeg

    Sequence, based on observed residues (ATOM records):
    >3cz3B (B:)
sieiplheiirklermnqkkqaqrkrhklnrkerghkspseqrrselwharqvels

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3cz3C (C:)
smasieiplheiirklermnqkkqaqrkrhklnrkerghkspseqrrselwharqvelsa
insdnssdeg

    Sequence, based on observed residues (ATOM records):
    >3cz3C (C:)
eiplheiirklermnqkkqaqrkrhklnrkerghkspseqrrselwharqvels

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3cz3D (D:)
smasieiplheiirklermnqkkqaqrkrhklnrkerghkspseqrrselwharqvelsa
insdnssdeg

    Sequence, based on observed residues (ATOM records):
    >3cz3D (D:)
sieiplheiirklermnqkkqaqrkrhklnrkerghkspseqrrselwharqvels

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.