PDB entry 3cyq

View 3cyq on RCSB PDB site
Description: the crystal structure of the complex of the c-terminal domain of helicobacter pylori motb (residues 125-256) with n-acetylmuramic acid
Deposited on 2008-04-26, released 2008-07-08
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'B':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'C':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'D':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'E':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'F':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'G':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'H':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'I':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'J':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'K':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'L':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'M':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'N':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'O':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Chain 'P':
    Compound: Chemotaxis protein motB
    Species: Helicobacter pylori
    Gene: motB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56427 (6-End)
      • expression tag (0-5)
  • Heterogens: AMU, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3cyqA (A:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqA (A:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3cyqB (B:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqB (B:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3cyqC (C:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqC (C:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnp

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3cyqD (D:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqD (D:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefn

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3cyqE (E:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqE (E:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefn

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3cyqF (F:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqF (F:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnp

  • Chain 'G':
    Sequence, based on SEQRES records:
    >3cyqG (G:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqG (G:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnph

  • Chain 'H':
    Sequence, based on SEQRES records:
    >3cyqH (H:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqH (H:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefn

  • Chain 'I':
    Sequence, based on SEQRES records:
    >3cyqI (I:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqI (I:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefn

  • Chain 'J':
    Sequence, based on SEQRES records:
    >3cyqJ (J:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqJ (J:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnph

  • Chain 'K':
    Sequence, based on SEQRES records:
    >3cyqK (K:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqK (K:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefn

  • Chain 'L':
    Sequence, based on SEQRES records:
    >3cyqL (L:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqL (L:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefn

  • Chain 'M':
    Sequence, based on SEQRES records:
    >3cyqM (M:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqM (M:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnp

  • Chain 'N':
    Sequence, based on SEQRES records:
    >3cyqN (N:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqN (N:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnph

  • Chain 'O':
    Sequence, based on SEQRES records:
    >3cyqO (O:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqO (O:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefn

  • Chain 'P':
    Sequence, based on SEQRES records:
    >3cyqP (P:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefnphkqqe

    Sequence, based on observed residues (ATOM records):
    >3cyqP (P:)
gidpftfenatsdainqdmmlyieriakiiqklpkrvhinvrgftddtplvktrfkshye
laanrayrvmkvliqygvnpnqlsfssygstnpiapndslenrmknnrveiffstdandl
skihsildnefn