PDB entry 3cvs

View 3cvs on RCSB PDB site
Description: Crystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Adenine Base Pair
Class: hydrolase/DNA
Keywords: AlkA, 8oxoguanine, DNA repair, host-guest complex, DNA structure, DNA damage, Hydrolase, hydrolase-DNA COMPLEX
Deposited on 2008-04-19, released 2008-09-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA-3-methyladenine glycosylase 2
    Species: ESCHERICHIA COLI
    Gene: alkA, aidA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3cvsa1, d3cvsa2
  • Chain 'B':
    Compound: DNA-3-methyladenine glycosylase 2
    Species: ESCHERICHIA COLI
    Gene: alkA, aidA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3cvsb1, d3cvsb2
  • Chain 'C':
    Compound: DNA-3-methyladenine glycosylase 2
    Species: ESCHERICHIA COLI
    Gene: alkA, aidA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3cvsc1, d3cvsc2
  • Chain 'D':
    Compound: DNA-3-methyladenine glycosylase 2
    Species: ESCHERICHIA COLI
    Gene: alkA, aidA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3cvsd1, d3cvsd2
  • Chain 'E':
    Compound: DNA (5'-d(*dgp*dap*dcp*dap*dtp*dgp*dap*(8og)p*dtp*dgp*dcp*dc)-3')
  • Chain 'F':
    Compound: DNA (5'-d(*dgp*dgp*dcp*dap*dap*dtp*dcp*dap*dtp*dgp*dtp*dc)-3')
  • Chain 'G':
    Compound: DNA (5'-d(*dgp*dap*dcp*dap*dtp*dgp*dap*(8og)p*dtp*dgp*dcp*dc)-3')
  • Chain 'H':
    Compound: DNA (5'-d(*dgp*dgp*dcp*dap*dap*dtp*dcp*dap*dtp*dgp*dtp*dc)-3')
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3cvsA (A:)
mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlh
inlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvra
ilgqlvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkrae
alihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddyl
ikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3cvsB (B:)
mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlh
inlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvra
ilgqlvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkrae
alihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddyl
ikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3cvsC (C:)
mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlh
inlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvra
ilgqlvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkrae
alihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddyl
ikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3cvsD (D:)
mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlh
inlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvra
ilgqlvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkrae
alihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddyl
ikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.