PDB entry 3cpj
View 3cpj on RCSB PDB site
Description: Crystal structure of Ypt31 in complex with yeast Rab-GDI
Class: protein transport
Keywords: Rab GTPase, prenylation, vesicular transport, Acetylation, Golgi apparatus, GTP-binding, Lipoprotein, Membrane, Nucleotide-binding, Protein transport, Cytoplasm, GTPase activation, Phosphoprotein
Deposited on
2008-03-31, released
2008-05-06
The last revision prior to the SCOPe 2.04 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: 0.202
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'B':
Compound: GTP-binding protein YPT31/YPT8
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
- Chain 'G':
Compound: Rab GDP-dissociation inhibitor
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3cpjg1, d3cpjg2, d3cpjg3 - Heterogens: CL, MG, GDP, HOH
PDB Chain Sequences:
- Chain 'B':
No sequence available.
- Chain 'G':
Sequence, based on SEQRES records: (download)
>3cpjG (G:)
mdqetidtdydvivlgtgitecilsgllsvdgkkvlhidkqdhyggeaasvtlsqlyekf
kqnpiskeereskfgkdrdwnvdlipkflmangeltnilihtdvtryvdfkqvsgsyvfk
qgkiykvpaneieaissplmgifekrrmkkflewissykeddlsthqgldldkntmdevy
ykfglgnstkefighamalwtnddylqqparpsferillycqsvarygkspylypmyglg
elpqgfarlsaiyggtymldtpidevlykkdtgkfegvktklgtfkaplviadptyfpek
ckstgqrviraicilnhpvpntsnadslqiiipqsqlgrksdiyvaivsdahnvcskghy
laiistiietdkphielepafkllgpieekfmgiaelfepredgskdniylsrsydassh
fesmtddvkdiyfrvtghplvlkqrqeqekq
Sequence, based on observed residues (ATOM records): (download)
>3cpjG (G:)
idtdydvivlgtgitecilsgllsvdgkkvlhidkqdhyggeaasvtlsqlyekfkqnpi
skeereskfgkdrdwnvdlipkflmangeltnilihtdvtryvdfkqvsgsyvfkqgkiy
kvpaneieaissplmgifekrrmkkflewissykeddlsthqgldldkntmdevyykfgl
gnstkefighamalwtnddylqqparpsferillycqsvarygkspylypmyglgelpqg
farlsaiyggtymldtpidevlykkdtgkfegvktklgtfkaplviadptyfpekckstg
qrviraicilnhpvpntsnadslqiiipqsqlgrksdiyvaivsdahnvcskghylaiis
tiietdkphielepafkllgpieekfmgiaelfepredgskdniylsrsydasshfesmt
ddvkdiyfrvtghplvlk