PDB entry 3cdx

View 3cdx on RCSB PDB site
Description: crystal structure of succinylglutamatedesuccinylase/aspartoacylase from rhodobacter sphaeroides
Deposited on 2008-02-27, released 2008-03-11
The last revision was dated 2021-02-03, with a file datestamp of 2021-01-29.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Succinylglutamatedesuccinylase/aspartoacylase
    Species: Rhodobacter sphaeroides [TaxId:272943]
    Gene: RSP_3886
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Succinylglutamatedesuccinylase/aspartoacylase
    Species: Rhodobacter sphaeroides [TaxId:272943]
    Gene: RSP_3886
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Succinylglutamatedesuccinylase/aspartoacylase
    Species: Rhodobacter sphaeroides [TaxId:272943]
    Gene: RSP_3886
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Succinylglutamatedesuccinylase/aspartoacylase
    Species: Rhodobacter sphaeroides [TaxId:272943]
    Gene: RSP_3886
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Succinylglutamatedesuccinylase/aspartoacylase
    Species: Rhodobacter sphaeroides [TaxId:272943]
    Gene: RSP_3886
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Succinylglutamatedesuccinylase/aspartoacylase
    Species: Rhodobacter sphaeroides [TaxId:272943]
    Gene: RSP_3886
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3cdxA (A:)
mslnseaksriacdidfdrdgrqagyaraplsrnnsgwgtveipitvvkngsgptvlltg
gvhgdeyegqiaisdlarrlrpeevqgrvimlpavnmpaiqsdtrlspvdgrdinrcfpg
dprgtfsqmlahfldsvilpmadisvdmhtaghsydstpstnmhyladpalrartlaaae
afgaphnvvfggvdegstftscverrgivslgtelggwgrvniegvrigkrgilnvlkhm
gviegtpetaqrggaagtrhmmvreadayvmaprtglfepthyvgeevrtgetagwihfv
edvdtaplellyrrdgivwfgagpgrvtrgdavavvmedyndtwpqeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3cdxA (A:)
sriacdidfdrdgrqagyaraplsrnnsgwgtveipitvvkngsgptvlltggvhgdeye
gqiaisdlarrlrpeevqgrvimlpavnmpaiqsdtrlspvdgrdinrcfpgdprgtfsq
mlahfldsvilpmadisvdmhtaghsydstpstnmhyladpalrartlaaaeafgaphnv
vfgstftscverrgivslgtelggwgrvniegvrigkrgilnvlkhmgviegtpetaqrg
gaagtrhmmvreadayvmaprtglfepthyvgeevrtgetagwihfvedvdtaplellyr
rdgivwfgagpgrvtrgdavavvmedynd

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3cdxB (B:)
mslnseaksriacdidfdrdgrqagyaraplsrnnsgwgtveipitvvkngsgptvlltg
gvhgdeyegqiaisdlarrlrpeevqgrvimlpavnmpaiqsdtrlspvdgrdinrcfpg
dprgtfsqmlahfldsvilpmadisvdmhtaghsydstpstnmhyladpalrartlaaae
afgaphnvvfggvdegstftscverrgivslgtelggwgrvniegvrigkrgilnvlkhm
gviegtpetaqrggaagtrhmmvreadayvmaprtglfepthyvgeevrtgetagwihfv
edvdtaplellyrrdgivwfgagpgrvtrgdavavvmedyndtwpqeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3cdxB (B:)
sriacdidfdrdgrqagyaraplsrnnsgwgtveipitvvkngsgptvlltggvhgdeye
gqiaisdlarrlrpeevqgrvimlpavnmpaiqsdtrlspvdgrdinrcfpgdprgtfsq
mlahfldsvilpmadisvdmhtaghsydstpstnmhyladpalrartlaaaeafgaphnv
vgstftscverrgivslgtelggwgrvniegvrigkrgilnvlkhmgviegtpetaqrgg
aagtrhmmvreadayvmaprtglfepthyvgeevrtgetagwihfvedvdtaplellyrr
dgivwfgagpgrvtrgdavavvmedynd

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3cdxC (C:)
mslnseaksriacdidfdrdgrqagyaraplsrnnsgwgtveipitvvkngsgptvlltg
gvhgdeyegqiaisdlarrlrpeevqgrvimlpavnmpaiqsdtrlspvdgrdinrcfpg
dprgtfsqmlahfldsvilpmadisvdmhtaghsydstpstnmhyladpalrartlaaae
afgaphnvvfggvdegstftscverrgivslgtelggwgrvniegvrigkrgilnvlkhm
gviegtpetaqrggaagtrhmmvreadayvmaprtglfepthyvgeevrtgetagwihfv
edvdtaplellyrrdgivwfgagpgrvtrgdavavvmedyndtwpqeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3cdxC (C:)
sriacdidfdrdgrqagyaraplsrnnsgwgtveipitvvkngsgptvlltggvhgdeye
gqiaisdlarrlrpeevqgrvimlpavnmpaiqsdtrlspvdgrdinrcfpgdprgtfsq
mlahfldsvilpmadisvdmhtaghsydstpstnmhyladpalrartlaaaeafgaphnv
vstftscverrgivslgtelggwgrvniegvrigkrgilnvlkhmgviegtpetaqrgga
agtrhmmvreadayvmaprtglfepthyvgeevrtgetagwihfvedvdtaplellyrrd
givwfgagpgrvtrgdavavvmedy

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3cdxD (D:)
mslnseaksriacdidfdrdgrqagyaraplsrnnsgwgtveipitvvkngsgptvlltg
gvhgdeyegqiaisdlarrlrpeevqgrvimlpavnmpaiqsdtrlspvdgrdinrcfpg
dprgtfsqmlahfldsvilpmadisvdmhtaghsydstpstnmhyladpalrartlaaae
afgaphnvvfggvdegstftscverrgivslgtelggwgrvniegvrigkrgilnvlkhm
gviegtpetaqrggaagtrhmmvreadayvmaprtglfepthyvgeevrtgetagwihfv
edvdtaplellyrrdgivwfgagpgrvtrgdavavvmedyndtwpqeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3cdxD (D:)
sriacdidfdrdgrqagyaraplsrnnsgwgtveipitvvkngsgptvlltggvhgdeye
gqiaisdlarrlrpeevqgrvimlpavnmpaiqsdtrlspvdgrdinrcfpgdprgtfsq
mlahfldsvilpmadisvdmhtaghsydstpstnmhdpalrartlaaaeafgaphnvvst
ftscverrgivslgtelggwgrvniegvrigkrgilnvlkhmgviegtpetaqrggaagt
rhmmvreadayvmaprtglfepthyvgeevrtgetagwihfvedvdtaplellyrrdgiv
wfgagpgrvtrgdavavvmedy

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3cdxE (E:)
mslnseaksriacdidfdrdgrqagyaraplsrnnsgwgtveipitvvkngsgptvlltg
gvhgdeyegqiaisdlarrlrpeevqgrvimlpavnmpaiqsdtrlspvdgrdinrcfpg
dprgtfsqmlahfldsvilpmadisvdmhtaghsydstpstnmhyladpalrartlaaae
afgaphnvvfggvdegstftscverrgivslgtelggwgrvniegvrigkrgilnvlkhm
gviegtpetaqrggaagtrhmmvreadayvmaprtglfepthyvgeevrtgetagwihfv
edvdtaplellyrrdgivwfgagpgrvtrgdavavvmedyndtwpqeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3cdxE (E:)
sriacdidfdrdgrqagyaraplsrnnsgwgtveipitvvkngsgptvlltggvhgdeye
gqiaisdlarrlrpeevqgrvimlpavnmpaiqsdtrlspvdgrdinrcfpgdprgtfsq
mlahfldsvilpmadisvdmhtaghsydstpstnmhyladpalrartlaaaeafgaphnv
vfstftscverrgivslgtelggwgrvniegvrigkrgilnvlkhmgviegtpetaqrgg
aagtrhmmvreadayvmaprtglfepthyvgeevrtgetagwihfvedvdtaplellyrr
dgivwfgagpgrvtrgdavavvmedy

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3cdxF (F:)
mslnseaksriacdidfdrdgrqagyaraplsrnnsgwgtveipitvvkngsgptvlltg
gvhgdeyegqiaisdlarrlrpeevqgrvimlpavnmpaiqsdtrlspvdgrdinrcfpg
dprgtfsqmlahfldsvilpmadisvdmhtaghsydstpstnmhyladpalrartlaaae
afgaphnvvfggvdegstftscverrgivslgtelggwgrvniegvrigkrgilnvlkhm
gviegtpetaqrggaagtrhmmvreadayvmaprtglfepthyvgeevrtgetagwihfv
edvdtaplellyrrdgivwfgagpgrvtrgdavavvmedyndtwpqeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3cdxF (F:)
sriacdidfdrdgrqagyaraplsrnnsgwgtveipitvvkngsgptvlltggvhgdeye
gqiaisdlarrlrpeevqgrvimlpavnmpaiqsdtrlspvdgrdinrcfpgdprgtfsq
mlahfldsvilpmadisvdmhtaghsydstpstnmhyldpalrartlaaaeafgaphnvv
stftscverrgivslgtelggwgrvniegvrigkrgilnvlkhmgviegtpetaqrggaa
gtrhmmvreadayvmaprtglfepthyvgeevrtgetagwihfvedvdtaplellyrrdg
ivwfgagpgrvtrgdavavvmedyndtw