PDB entry 3ca1
View 3ca1 on RCSB PDB site
Description: Sambucus nigra agglutinin II (SNA-II)- tetragonal crystal form- complexed to galactose
Class: Sugar binding protein, Plant protein
Keywords: BETA-TREFOIL, RICIN-B DOMAIN, GLYCOSYLATION, LECTIN, Glycoprotein, SUGAR BINDING PROTEIN, Plant protein
Deposited on
2008-02-19, released
2008-11-25
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-04.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.54
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Agglutinin II
Species: Sambucus nigra
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3ca1a1, d3ca1a2 - Heterogens: NAG, GLA, SO4, ACT, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3ca1A (A:)
tsftrnivgrdglcvdvrngydtdgtplqlwpcgtqrnqrwtfdsddtirsmgkcmtang
lnngsnivifncstaaenaikwevpidgsiinpssglvmtapraasrtillledniyaas
qgwtvtnnvkpivasivgykemclqsngenngvwmedceatslqqqwalygdrtirvnst
rglcvttngynskdliiilkcqglpsqrwffnsdgaivnpksrlvmdvrasnvslreiii
fpatgnpnqqwvtqvlps
Sequence, based on observed residues (ATOM records): (download)
>3ca1A (A:)
tsftrnivgrdglcvdvrngydtdgtplqlwpcgtqrnqrwtfdsddtirsmgkcmtang
lnngsnivifncstaaenaikwevpidgsiinpssglvmtapraasrtillledniyaas
qgwtvtnnvkpivasivgykemclqsngenngvwmedceatslqqqwalygdrtirvnst
rglcvttngynskdliiilkcqglpsqrwffnsdgaivnpksrlvmdvrasnvslreiii
fpatgnpnqqwvtqvlp