PDB entry 3c93

View 3c93 on RCSB PDB site
Description: Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with N-acetyl glucosamine (NAG) at 2.6 A resolution
Class: antibiotic
Keywords: peptidoglycan recognition protein, complex, nag, immune response, secreted, antimicrobial, antibiotic
Deposited on 2008-02-15, released 2008-03-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2010-07-14, with a file datestamp of 2010-07-09.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.203
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptidoglycan recognition protein
    Species: Camelus dromedarius [TaxId:9838]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3c93a_
  • Chain 'B':
    Compound: Peptidoglycan recognition protein
    Species: Camelus dromedarius [TaxId:9838]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3c93b_
  • Chain 'C':
    Compound: Peptidoglycan recognition protein
    Species: Camelus dromedarius [TaxId:9838]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3c93c_
  • Chain 'D':
    Compound: Peptidoglycan recognition protein
    Species: Camelus dromedarius [TaxId:9838]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3c93d_
  • Heterogens: NDG, TLA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3c93A (A:)
edppacgsivprrewralasecrerltrpvryvvvshtagshcdtpascaqqaqnvqsyh
vrnlgwcdvgynfligedglvyegrgwnikgahagptwnpisigisfmgnymnrvpppra
lraaqnllacgvalgalrsnyevkghrdvqptlspgdrlyeiiqtwshyra

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3c93B (B:)
edppacgsivprrewralasecrerltrpvryvvvshtagshcdtpascaqqaqnvqsyh
vrnlgwcdvgynfligedglvyegrgwnikgahagptwnpisigisfmgnymnrvpppra
lraaqnllacgvalgalrsnyevkghrdvqptlspgdrlyeiiqtwshyra

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3c93C (C:)
edppacgsivprrewralasecrerltrpvryvvvshtagshcdtpascaqqaqnvqsyh
vrnlgwcdvgynfligedglvyegrgwnikgahagptwnpisigisfmgnymnrvpppra
lraaqnllacgvalgalrsnyevkghrdvqptlspgdrlyeiiqtwshyra

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3c93D (D:)
edppacgsivprrewralasecrerltrpvryvvvshtagshcdtpascaqqaqnvqsyh
vrnlgwcdvgynfligedglvyegrgwnikgahagptwnpisigisfmgnymnrvpppra
lraaqnllacgvalgalrsnyevkghrdvqptlspgdrlyeiiqtwshyra