PDB entry 3c8j
View 3c8j on RCSB PDB site
Description: The crystal structure of natural killer cell receptor Ly49C
Class: immune system
Keywords: Natural killer cell receptor, MHC, Virus, Crystal structure, IMMUNE SYSTEM
Deposited on
2008-02-12, released
2008-04-15
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-04-28, with a file datestamp of
2009-04-24.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.202
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Natural killer cell receptor Ly49C
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot Q61198 (Start-202)
- engineered (111)
- engineered (133)
- engineered (163)
Domains in SCOPe 2.08: d3c8ja_ - Chain 'B':
Compound: Natural killer cell receptor Ly49C
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot Q61198 (Start-202)
- engineered (111)
- engineered (133)
- engineered (163)
Domains in SCOPe 2.08: d3c8jb_ - Chain 'C':
Compound: Natural killer cell receptor Ly49C
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot Q61198 (Start-202)
- engineered (111)
- engineered (133)
- engineered (163)
Domains in SCOPe 2.08: d3c8jc_ - Chain 'D':
Compound: Natural killer cell receptor Ly49C
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot Q61198 (Start-202)
- engineered (111)
- engineered (133)
- engineered (163)
Domains in SCOPe 2.08: d3c8jd_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3c8jA (A:)
maskifqynqhkqetnetlnhhncsnmqrafnlkeemltnksidcrpsnetleyikgeqh
drwdsktktvldssrdtgrgvkywfcystkcyyfimnkttwsgckancqhygvpilkied
edelkflqrhvipgnywiglsydkkkkewawidngpskldmkikkmnfksrgcvflskar
iedidcnipyycicgkkldkfpd
Sequence, based on observed residues (ATOM records): (download)
>3c8jA (A:)
tgrgvkywfcystkcyyfimnkttwsgckancqhygvpilkiededelkflqrhvipgny
wiglsydkkkkewawidngpskldmkikkmnfksrgcvflskariedidcnipyycicgk
kldkfpd
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3c8jB (B:)
maskifqynqhkqetnetlnhhncsnmqrafnlkeemltnksidcrpsnetleyikgeqh
drwdsktktvldssrdtgrgvkywfcystkcyyfimnkttwsgckancqhygvpilkied
edelkflqrhvipgnywiglsydkkkkewawidngpskldmkikkmnfksrgcvflskar
iedidcnipyycicgkkldkfpd
Sequence, based on observed residues (ATOM records): (download)
>3c8jB (B:)
grgvkywfcystkcyyfimnkttwsgckancqhygvpilkiededelkflqrhvipgnyw
iglsydkkkkewawidngpskldmkikkmnfksrgcvflskariedidcnipyycicgkk
ldkfpd
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3c8jC (C:)
maskifqynqhkqetnetlnhhncsnmqrafnlkeemltnksidcrpsnetleyikgeqh
drwdsktktvldssrdtgrgvkywfcystkcyyfimnkttwsgckancqhygvpilkied
edelkflqrhvipgnywiglsydkkkkewawidngpskldmkikkmnfksrgcvflskar
iedidcnipyycicgkkldkfpd
Sequence, based on observed residues (ATOM records): (download)
>3c8jC (C:)
grgvkywfcystkcyyfimnkttwsgckancqhygvpilkiededelkflqrhvipgnyw
iglsydkkkkewawidngpskldmkikkmnfksrgcvflskariedidcnipyycicgkk
ldkfpd
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3c8jD (D:)
maskifqynqhkqetnetlnhhncsnmqrafnlkeemltnksidcrpsnetleyikgeqh
drwdsktktvldssrdtgrgvkywfcystkcyyfimnkttwsgckancqhygvpilkied
edelkflqrhvipgnywiglsydkkkkewawidngpskldmkikkmnfksrgcvflskar
iedidcnipyycicgkkldkfpd
Sequence, based on observed residues (ATOM records): (download)
>3c8jD (D:)
srdtgrgvkywfcystkcyyfimnkttwsgckancqhygvpilkiededelkflqrhvip
gnywiglsydkkkkewawidngpskldmkikkmnfksrgcvflskariedidcnipyyci
cgkkldkfpd