PDB entry 3c74

View 3c74 on RCSB PDB site
Description: X-ray structure of the uridine phosphorylase from salmonella typhimurium in complex with 2,2'-anhydrouridine at 2.38a resolution
Class: transferase
Keywords: TRANSFERASE, Cytoplasm, Glycosyltransferase
Deposited on 2008-02-06, released 2009-02-10
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-10, with a file datestamp of 2009-02-06.
Experiment type: XRAY
Resolution: 2.38 Å
R-factor: 0.209
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uridine phosphorylase
    Species: Salmonella typhimurium [TaxId:602]
    Gene: UDP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3c74a_
  • Chain 'B':
    Compound: Uridine phosphorylase
    Species: Salmonella typhimurium [TaxId:602]
    Gene: UDP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3c74b_
  • Chain 'C':
    Compound: Uridine phosphorylase
    Species: Salmonella typhimurium [TaxId:602]
    Gene: UDP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3c74c_
  • Chain 'D':
    Compound: Uridine phosphorylase
    Species: Salmonella typhimurium [TaxId:602]
    Gene: UDP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3c74d_
  • Chain 'E':
    Compound: Uridine phosphorylase
    Species: Salmonella typhimurium [TaxId:602]
    Gene: UDP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3c74e_
  • Chain 'F':
    Compound: Uridine phosphorylase
    Species: Salmonella typhimurium [TaxId:602]
    Gene: UDP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3c74f_
  • Heterogens: ANU, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3c74A (A:)
    ksksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgk
    avivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgas
    lhfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrf
    kgsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqtesh
    avkivveaarrll
    

    Sequence, based on observed residues (ATOM records): (download)
    >3c74A (A:)
    sdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkavi
    vcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslhf
    apmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkgs
    meewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipeshavkivveaarr
    ll
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3c74B (B:)
    ksksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgk
    avivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgas
    lhfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrf
    kgsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqtesh
    avkivveaarrll
    

    Sequence, based on observed residues (ATOM records): (download)
    >3c74B (B:)
    ksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkav
    ivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslh
    fapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkg
    smeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipneshavkivveaa
    rrll
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3c74C (C:)
    ksksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgk
    avivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgas
    lhfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrf
    kgsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqtesh
    avkivveaarrll
    

    Sequence, based on observed residues (ATOM records): (download)
    >3c74C (C:)
    sdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkavi
    vcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslhf
    apmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkgs
    meewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnashavkivveaar
    rll
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3c74D (D:)
    ksksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgk
    avivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgas
    lhfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrf
    kgsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqtesh
    avkivveaarrll
    

    Sequence, based on observed residues (ATOM records): (download)
    >3c74D (D:)
    ksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkav
    ivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslh
    fapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkg
    smeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqteshav
    kivveaarrll
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >3c74E (E:)
    ksksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgk
    avivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgas
    lhfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrf
    kgsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqtesh
    avkivveaarrll
    

    Sequence, based on observed residues (ATOM records): (download)
    >3c74E (E:)
    sdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkavi
    vcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslhf
    apmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkgs
    meewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipshavkivveaarrl
    l
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >3c74F (F:)
    ksksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgk
    avivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgas
    lhfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrf
    kgsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqtesh
    avkivveaarrll
    

    Sequence, based on observed residues (ATOM records): (download)
    >3c74F (F:)
    sdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkavi
    vcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslhf
    apmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkgs
    meewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkeshavkiv
    veaarrll