PDB entry 3c6p

View 3c6p on RCSB PDB site
Description: Small molecule agonists and antagonists of F-box protein-substrate interactions in auxin perception and signaling
Class: signaling protein
Keywords: auxin, ubiquitin ligase, F-box, small molecule, chemical biology, plant physiology, Auxin signaling pathway, Chromosome partition, Cytoplasm, Cytoskeleton, Developmental protein, Ethylene signaling pathway, Nucleus, Ubl conjugation pathway, Cell cycle, Leucine-rich repeat, Plant defense, SIGNALING PROTEIN
Deposited on 2008-02-04, released 2008-04-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-10-14, with a file datestamp of 2020-10-09.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SKP1-like protein 1A
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: SKP1A, ASK1, SKP1, UIP1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3c6pa1, d3c6pa2
  • Chain 'B':
    Compound: transport inhibitor response 1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: TIR1, FBL1, WEI1
    Database cross-references and differences (RAF-indexed):
  • Heterogens: IHP, 2S3, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3c6pA (A:)
    msakkivlkssdgesfeveeavalesqtiahmveddcvdngvplpnvtskilakvieyck
    rhveaaaskaeavegaatsdddlkawdadfmkidqatlfelilaanylniknlldltcqt
    vadmikgktpeeirttfnikndftpeeeeevrrenqwafe
    

    Sequence, based on observed residues (ATOM records): (download)
    >3c6pA (A:)
    lkseavalesqtiaplpnvtskilakvieylilaanylniknlldltcqtvadmikgktp
    eeirttfnikndftpeeeeevrrenqwafe
    

  • Chain 'B':
    No sequence available.