PDB entry 3c6o

View 3c6o on RCSB PDB site
Description: Small molecule agonists and antagonists of F-box protein-substrate interactions in auxin perception and signaling
Class: signaling protein
Keywords: auxin, ubiquitin ligase, F-box, small molecule, chemical biology, plant physiology, Auxin signaling pathway, Chromosome partition, Cytoskeleton, Developmental protein, Ethylene signaling pathway, Nucleus, Ubl conjugation pathway, Cell cycle, Leucine-rich repeat, Plant defense, SIGNALING PROTEIN
Deposited on 2008-02-04, released 2008-04-22
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-11-23, with a file datestamp of 2011-11-18.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.187
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: SKP1-like protein 1A
  Species: Arabidopsis thaliana [TaxId:3702]
  Gene: SKP1A, ASK1, SKP1, UIP1
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q39255 (Start-159)
  Domains in SCOPe 2.05: d3c6oa1
• Chain 'B':
  Compound: transport inhibitor response 1
  Species: Arabidopsis thaliana [TaxId:3702]
  Gene: TIR1, FBL1, WEI1
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q570C0
• Heterogens: IHP, 2S2, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >3c6oA (A:)
  msakkivlkssdgesfeveeavalesqtiahmveddcvdngvplpnvtskilakvieyck
  rhveaaaskaeavegaatsdddlkawdadfmkidqatlfelilaanylniknlldltcqt
  vadmikgktpeeirttfnikndftpeeeeevrrenqwafe
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >3c6oA (A:)
  alesqtiailakvieylilaanylniknlldltcqtvadmikgktpeeirttfnikndft
  peeeeevrrenqwafe
  

  
  
• Chain 'B':
  No sequence available.