PDB entry 3c56

View 3c56 on RCSB PDB site
Description: Class II fructose-1,6-bisphosphate aldolase from helicobacter pylori in complex with N-(3-Hydroxypropyl)-glycolohydroxamic acid bisphosphate, a competitive inhibitor
Class: lyase
Keywords: CLASS II, FBP, aldolase, glycolysis, inhibitor, Lyase, Metal-binding, Zinc
Deposited on 2008-01-30, released 2008-08-26
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.172
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fructose-bisphosphate aldolase
    Species: Helicobacter pylori [TaxId:210]
    Gene: fba
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56109 (0-306)
      • conflict (47)
      • conflict (66)
    Domains in SCOPe 2.03: d3c56a_
  • Chain 'B':
    Compound: Fructose-bisphosphate aldolase
    Species: Helicobacter pylori [TaxId:210]
    Gene: fba
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56109 (0-306)
      • conflict (47)
      • conflict (66)
    Domains in SCOPe 2.03: d3c56b_
  • Heterogens: ZN, PH4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3c56A (A:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelgrlmgiednisvdekdavlvnpkeaeqfvkesqvdylapaigtsh
gafkfkgepkldferlqevkrltniplvlhgasaipdnvrksyldaggdlkgskgvpfef
lqesvkgginkvntdtdlriafiaevrkvanedksqfdlrkffspaqlalknvvkermkl
lgsanki

    Sequence, based on observed residues (ATOM records): (download) 
    >3c56A (A:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelgrlmgiavlvnpkeaeqfvkesqvdylapaigtshgafkfkgepk
ldferlqevkrltniplvlhgasaipdnvrksyldaggdlkgskgvpfeflqesvkggin
kvntdtdlriafiaevrkvanedksqfdlrkffspaqlalknvvkermkllgsanki

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3c56B (B:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelgrlmgiednisvdekdavlvnpkeaeqfvkesqvdylapaigtsh
gafkfkgepkldferlqevkrltniplvlhgasaipdnvrksyldaggdlkgskgvpfef
lqesvkgginkvntdtdlriafiaevrkvanedksqfdlrkffspaqlalknvvkermkl
lgsanki

    Sequence, based on observed residues (ATOM records): (download) 
    >3c56B (B:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelgrlmvlvnpkeaeqfvkesqvdylapaigtshgafkfkgepkldf
erlqevkrltniplvlhgasaipdnvrksyldaggdlkgskgvpfeflqesvkgginkvn
tdtdlriafiaevrkvanedksqfdlrkffspaqlalknvvkermkllgsanki