PDB entry 3c3e

View 3c3e on RCSB PDB site
Description: Crystal structure of 2-phospho-(S)-lactate transferase from Methanosarcina mazei in complex with Fo and GDP. Northeast Structural Genomics Consortium target MaR46
Class: transferase
Keywords: alpha-beta protein, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, Magnesium, Transferase
Deposited on 2008-01-28, released 2008-02-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.206
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2-phospho-L-lactate transferase
    Species: Methanosarcina mazei [TaxId:192952]
    Gene: cofD, MM_1874
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8PVT6 (0-302)
      • expression tag (303-304)
    Domains in SCOPe 2.08: d3c3ea1, d3c3ea2
  • Chain 'B':
    Compound: 2-phospho-L-lactate transferase
    Species: Methanosarcina mazei [TaxId:192952]
    Gene: cofD, MM_1874
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8PVT6 (0-302)
      • expression tag (303-304)
    Domains in SCOPe 2.08: d3c3eb1, d3c3eb2
  • Chain 'C':
    Compound: 2-phospho-L-lactate transferase
    Species: Methanosarcina mazei [TaxId:192952]
    Gene: cofD, MM_1874
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8PVT6 (0-302)
      • expression tag (303-304)
    Domains in SCOPe 2.08: d3c3ec1, d3c3ec2
  • Chain 'D':
    Compound: 2-phospho-L-lactate transferase
    Species: Methanosarcina mazei [TaxId:192952]
    Gene: cofD, MM_1874
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8PVT6 (0-302)
      • expression tag (303-304)
    Domains in SCOPe 2.08: d3c3ed1, d3c3ed2
  • Heterogens: FO1, GDP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3c3eA (A:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qaflehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3c3eA (A:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qafle

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3c3eB (B:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qaflehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3c3eB (B:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qafle

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3c3eC (C:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qaflehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3c3eC (C:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qafle

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3c3eD (D:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qaflehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3c3eD (D:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qafle