PDB entry 3c3d

View 3c3d on RCSB PDB site
Description: Crystal structure of 2-phospho-(S)-lactate transferase from Methanosarcina mazei in complex with Fo and phosphate. Northeast Structural Genomics Consortium target MaR46
Class: transferase
Keywords: alpha-beta protein, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, Magnesium, Transferase
Deposited on 2008-01-28, released 2008-02-19
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.195
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2-phospho-L-lactate transferase
    Species: Methanosarcina mazei [TaxId:192952]
    Gene: cofD, MM_1874
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8PVT6 (0-302)
      • expression tag (303-305)
    Domains in SCOPe 2.07: d3c3da1, d3c3da2
  • Chain 'B':
    Compound: 2-phospho-L-lactate transferase
    Species: Methanosarcina mazei [TaxId:192952]
    Gene: cofD, MM_1874
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8PVT6 (0-302)
      • expression tag (303-305)
    Domains in SCOPe 2.07: d3c3db1, d3c3db2
  • Chain 'C':
    Compound: 2-phospho-L-lactate transferase
    Species: Methanosarcina mazei [TaxId:192952]
    Gene: cofD, MM_1874
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8PVT6 (0-302)
      • expression tag (303-305)
    Domains in SCOPe 2.07: d3c3dc1, d3c3dc2
  • Chain 'D':
    Compound: 2-phospho-L-lactate transferase
    Species: Methanosarcina mazei [TaxId:192952]
    Gene: cofD, MM_1874
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8PVT6 (0-302)
      • expression tag (303-305)
    Domains in SCOPe 2.07: d3c3dd1, d3c3dd2
  • Heterogens: PO4, FO1, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3c3dA (A:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qaflehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3c3dA (A:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qafleh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3c3dB (B:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qaflehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3c3dB (B:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qafleh

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3c3dC (C:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qaflehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3c3dC (C:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qafleh

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3c3dD (D:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qaflehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3c3dD (D:)
miifsggtgtpklldglkeilpeeeltvvvntaedlwvsgnlispdldtvlylfsdqidr
krwwgiendtfgtyermkelgieeglklgdrdrathiirsniirdgasltdstvklsslf
gikanilpmsddpvstyietaegimhfqdfwigkrgepdvrgvdirgvseasispkvlea
fekeeniligpsnpitsigpiislpgmrellkkkkvvavspiignapvsgpagklmpacg
ievssmgvaeyyqdfldvfvfderdradefaferlgchasradtlmtstekskelaeivv
qafleh