PDB entry 3c39

View 3c39 on RCSB PDB site
Description: Crystal Structure of human phosphoglycerate kinase bound to 3-phosphoglycerate
Class: Transferase
Keywords: Two domain, kinase, beta sandwich, Acetylation, ATP-binding, Cytoplasm, Disease mutation, Glycolysis, Hereditary hemolytic anemia, Nucleotide-binding, Phosphoprotein, Polymorphism, Transferase
Deposited on 2008-01-28, released 2008-07-01
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.194
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoglycerate kinase 1
    Species: Homo sapiens [TaxId:9606]
    Gene: PGK1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3c39a_
  • Chain 'B':
    Compound: Phosphoglycerate kinase 1
    Species: Homo sapiens [TaxId:9606]
    Gene: PGK1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3c39b_
  • Heterogens: 3PG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3c39A (A:)
gshmslsnkltldkldvkgkrvvmrvdfnvpmknnqitnnqrikaavpsikfcldngaks
vvlmshlgrpdgvpmpdkyslepvavelksllgkdvlflkdcvgpevekacanpaagsvi
llenlrfhveeegkgkdasgnkvkaepakieafraslsklgdvyvndafgtahrahssmv
gvnlpqkaggflmkkelnyfakalesperpflailggakvadkiqlinnmldkvnemiig
ggmaftflkvlnnmeigtslfdeegakivkdlmskaekngvkitlpvdfvtadkfdenak
tgqatvasgipagwmgldcgpesskkyaeavtrakqivwngpvgvfeweafargtkalmd
evvkatsrgcitiigggdtatccakwntedkvshvstgggaslellegkvlpgvdalsni

    Sequence, based on observed residues (ATOM records): (download) 
    >3c39A (A:)
slsnkltldkldvkgkrvvmrvdfnvpmknnqitnnqrikaavpsikfcldngaksvvlm
shlgrpdgvpmpdkyslepvavelksllgkdvlflkdcvgpevekacanpaagsvillen
lrfhveeegkgkkaepakieafraslsklgdvyvndafgtahrahssmvgvnlpqkaggf
lmkkelnyfakalesperpflailggakvadkiqlinnmldkvnemiigggmaftflkvl
nnmeigtslfdeegakivkdlmskaekngvkitlpvdfvtadkfdenaktgqatvasgip
agwmgldcgpesskkyaeavtrakqivwngpvgvfeweafargtkalmdevvkatsrgci
tiiggdkvshvstgggaslellegkvlpgvdalsni

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3c39B (B:)
gshmslsnkltldkldvkgkrvvmrvdfnvpmknnqitnnqrikaavpsikfcldngaks
vvlmshlgrpdgvpmpdkyslepvavelksllgkdvlflkdcvgpevekacanpaagsvi
llenlrfhveeegkgkdasgnkvkaepakieafraslsklgdvyvndafgtahrahssmv
gvnlpqkaggflmkkelnyfakalesperpflailggakvadkiqlinnmldkvnemiig
ggmaftflkvlnnmeigtslfdeegakivkdlmskaekngvkitlpvdfvtadkfdenak
tgqatvasgipagwmgldcgpesskkyaeavtrakqivwngpvgvfeweafargtkalmd
evvkatsrgcitiigggdtatccakwntedkvshvstgggaslellegkvlpgvdalsni

    Sequence, based on observed residues (ATOM records): (download) 
    >3c39B (B:)
lsnkltldkldvkgkrvvmrvdfnvpmknnqitnnqrikaavpsikfcldngaksvvlms
hlgrpdgvpmpdkyslepvavelksllgkdvlflkdekacanpaagsvillenlrfhvee
egkgkdasgnkvkaepakieafraslsklgdvyvndafgtahrahssmvgvnlpqkaggf
lmkkelnyfakalesperpflailggakvadkiqlinnmldkvnemiigggmaftflkvl
nnmeigtslfdeegakivkdlmskaekngvkitlpvdfvtadkfdenaktgqatvasgip
agwmgldcgpesskkyaeavtrakqivwngpvgvfeweafargtkalmdevvkatsrgci
tiiggdkvshvstgggaslellegkvlpgvdalsni