PDB entry 3c1l

View 3c1l on RCSB PDB site
Description: Crystal structure of an antioxidant defense protein (mlr4105) from mesorhizobium loti maff303099 at 2.00 A resolution
Class: oxidoreductase
Keywords: Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, oxidoreductase
Deposited on 2008-01-23, released 2008-02-05
The last revision prior to the SCOPe 2.01 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.174
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative antioxidant defense protein Mlr4105
    Species: Mesorhizobium loti [TaxId:266835]
    Gene: NP_105057.1, mlr4105
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3c1la_
  • Chain 'B':
    Compound: Putative antioxidant defense protein Mlr4105
    Species: Mesorhizobium loti [TaxId:266835]
    Gene: NP_105057.1, mlr4105
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3c1lb_
  • Chain 'C':
    Compound: Putative antioxidant defense protein Mlr4105
    Species: Mesorhizobium loti [TaxId:266835]
    Gene: NP_105057.1, mlr4105
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3c1lc_
  • Chain 'D':
    Compound: Putative antioxidant defense protein Mlr4105
    Species: Mesorhizobium loti [TaxId:266835]
    Gene: NP_105057.1, mlr4105
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3c1ld_
  • Chain 'E':
    Compound: Putative antioxidant defense protein Mlr4105
    Species: Mesorhizobium loti [TaxId:266835]
    Gene: NP_105057.1, mlr4105
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3c1le_
  • Chain 'F':
    Compound: Putative antioxidant defense protein Mlr4105
    Species: Mesorhizobium loti [TaxId:266835]
    Gene: NP_105057.1, mlr4105
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3c1lf_
  • Chain 'G':
    Compound: Putative antioxidant defense protein Mlr4105
    Species: Mesorhizobium loti [TaxId:266835]
    Gene: NP_105057.1, mlr4105
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3c1lg_
  • Chain 'H':
    Compound: Putative antioxidant defense protein Mlr4105
    Species: Mesorhizobium loti [TaxId:266835]
    Gene: NP_105057.1, mlr4105
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3c1lh_
  • Chain 'I':
    Compound: Putative antioxidant defense protein Mlr4105
    Species: Mesorhizobium loti [TaxId:266835]
    Gene: NP_105057.1, mlr4105
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3c1li_
  • Chain 'J':
    Compound: Putative antioxidant defense protein Mlr4105
    Species: Mesorhizobium loti [TaxId:266835]
    Gene: NP_105057.1, mlr4105
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3c1lj_
  • Chain 'K':
    Compound: Putative antioxidant defense protein Mlr4105
    Species: Mesorhizobium loti [TaxId:266835]
    Gene: NP_105057.1, mlr4105
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3c1lk_
  • Chain 'L':
    Compound: Putative antioxidant defense protein Mlr4105
    Species: Mesorhizobium loti [TaxId:266835]
    Gene: NP_105057.1, mlr4105
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3c1ll_
  • Heterogens: CL, PEG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3c1lA (A:)
gmtgkisaldlasgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlml
gesglskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprq
tamlefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpn
deyhamar

    Sequence, based on observed residues (ATOM records): (download) 
    >3c1lA (A:)
kisaldlgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlmlgesgls
kldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprqtamlef
avklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpndeyham
ar

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3c1lB (B:)
gmtgkisaldlasgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlml
gesglskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprq
tamlefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpn
deyhamar

    Sequence, based on observed residues (ATOM records): (download) 
    >3c1lB (B:)
gkisaldlasgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlmlges
glskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprqtam
lefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpndey
hamar

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3c1lC (C:)
gmtgkisaldlasgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlml
gesglskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprq
tamlefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpn
deyhamar

    Sequence, based on observed residues (ATOM records): (download) 
    >3c1lC (C:)
gkisaldlgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlmlgesgl
skldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprqtamle
favklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpndeyha
mar

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3c1lD (D:)
gmtgkisaldlasgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlml
gesglskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprq
tamlefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpn
deyhamar

    Sequence, based on observed residues (ATOM records): (download) 
    >3c1lD (D:)
kisalgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlmlgesglskl
dremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprqtamlefav
klteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpndeyhamar

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3c1lE (E:)
gmtgkisaldlasgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlml
gesglskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprq
tamlefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpn
deyhamar

    Sequence, based on observed residues (ATOM records): (download) 
    >3c1lE (E:)
kisaldgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlmlgesglsk
ldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprqtamlefa
vklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpndeyhama
r

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3c1lF (F:)
gmtgkisaldlasgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlml
gesglskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprq
tamlefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpn
deyhamar

    Sequence, based on observed residues (ATOM records): (download) 
    >3c1lF (F:)
kisaldgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlmlgesglsk
ldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprqtamlefa
vklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpndeyhama
r

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3c1lG (G:)
gmtgkisaldlasgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlml
gesglskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprq
tamlefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpn
deyhamar

    Sequence, based on observed residues (ATOM records): (download) 
    >3c1lG (G:)
mtgkisaldlgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlmlges
glskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprqtam
lefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpndey
hamar

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3c1lH (H:)
gmtgkisaldlasgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlml
gesglskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprq
tamlefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpn
deyhamar

    Sequence, based on observed residues (ATOM records): (download) 
    >3c1lH (H:)
kisaldelseptkayfakceeklglvpnvlkayafddkklraftdiyndlmlgesglskl
dremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprqtamlefav
klteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpndeyhamar

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >3c1lI (I:)
gmtgkisaldlasgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlml
gesglskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprq
tamlefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpn
deyhamar

    Sequence, based on observed residues (ATOM records): (download) 
    >3c1lI (I:)
gkisaldelseptkayfakceeklglvpnvlkayafddkklraftdiyndlmlgesglsk
ldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprqtamlefa
vklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpndeyhama
r

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >3c1lJ (J:)
gmtgkisaldlasgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlml
gesglskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprq
tamlefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpn
deyhamar

    Sequence, based on observed residues (ATOM records): (download) 
    >3c1lJ (J:)
gkisaldlgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlmlgesgl
skldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprqtamle
favklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpndeyha
mar

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >3c1lK (K:)
gmtgkisaldlasgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlml
gesglskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprq
tamlefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpn
deyhamar

    Sequence, based on observed residues (ATOM records): (download) 
    >3c1lK (K:)
gkisaldelseptkayfakceeklglvpnvlkayafddkklraftdiyndlmlgesglsk
ldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprqtamlefa
vklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpndeyhama
r

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >3c1lL (L:)
gmtgkisaldlasgelseptkayfakceeklglvpnvlkayafddkklraftdiyndlml
gesglskldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprq
tamlefavklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpn
deyhamar

    Sequence, based on observed residues (ATOM records): (download) 
    >3c1lL (L:)
gkisaldelseptkayfakceeklglvpnvlkayafddkklraftdiyndlmlgesglsk
ldremiavavssinhcyycltahgaavrqlsgdpalgemlvmnfraadlsprqtamlefa
vklteepakiveadraalrkagfsdrdiwdiastaaffnmsnrvaaaidmrpndeyhama
r