PDB entry 3c0x

View 3c0x on RCSB PDB site
Description: I-SceI in complex with a top nicked DNA substrate
Deposited on 2008-01-21, released 2008-05-06
The last revision was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.255
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Intron-encoded endonuclease I-SceI
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: SCEI, OMEGA, SECY
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA (5'-d(*dc*dap*dcp*dgp*dcp*dtp*dap*dgp*dgp*dgp*dap*dtp*dap*da)-3')
    Species: synthetic, synthetic
  • Chain 'C':
    Compound: DNA (5'-d(p*dcp*dap*dgp*dgp*dgp*dtp*dap*dap*dtp*dap*dc)-3')
    Species: synthetic, synthetic
  • Chain 'D':
    Compound: DNA (5'-d(*dg*dgp*dtp*dap*dtp*dtp*dap*dcp*dcp*dcp*dtp*dgp*dtp*dtp*dap*dtp*dcp*dcp*dcp*dtp*dap*dgp*dcp*dgp*dt)-3')
    Species: synthetic, synthetic
  • Heterogens: CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3c0xA (A:)
mknikknqvmnlgpnskllkeyksqlielnieqfeagiglilgdayirsrdegktycmqf
ewknkaymdhvcllydqwvlspphkkervnhlgnlvitwgaqtfkhqafnklanlfivnn
kktipnnlvenyltpmslaywfmddggkwdynknstnksivlntqsftfeeveylvkglr
nkfqlncyvkinknkpiiyidsmsylifynlikpylipqmmyklpntissetflk

    Sequence, based on observed residues (ATOM records):
    >3c0xA (A:)
nikknqvmnlgpnskllkeyksqlielnieqfeagiglilgdayirsrdegktycmqfew
knkaymdhvcllydqwvlspphkkervnhlgnlvitwgaqtfkhqafnklanlfivnnkk
tipnnlvenyltpmslaywfmddggkwdynknstnksivlntqsftfeeveylvkglrnk
fqlncyvkinknkpiiyidsmsylifynlikpylipqmmyklp

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.