PDB entry 3by3

View 3by3 on RCSB PDB site
Description: Norwalk P domain A-trisaccharide complex
Deposited on 2008-01-15, released 2008-04-22
The last revision was dated 2008-06-10, with a file datestamp of 2008-06-06.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.223
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 58 kd capsid protein
    Species: Norwalk virus [TaxId:11983]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 58 kd capsid protein
    Species: Norwalk virus [TaxId:11983]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3by3A (A:)
pftlpnlplsslsnsraplpissmgispdnvqsvqfqngrctldgrlvgttpvslshvak
irgtsngtvinlteldgtpfhpfegpapigfpdlggcdwhinmtqfghssqtqydvdttp
dtfvphlgsiqangigsgnyvgvlswisppshpsgsqvdlwkipnygssiteathlapsv
yppgfgevlvffmskmpgpgaynlpcllpqeyishlaseqaptvgeaallhyvdpdtgrn
lgefkaypdgfltcvpngassgpqqlpingvfvfvswvsrfyqlkpvgtassargrlglr
r

    Sequence, based on observed residues (ATOM records):
    >3by3A (A:)
pftlpnlplsslsnsraplpissmgispdnvqsvqfqngrctldgrlvgttpvslshvak
irgtsngtvinlteldgtpfhpfegpapigfpdlggcdwhinmtqfghsqtqydvdttpd
tfvphlgsiqangigsgnyvgvlswisppshpsgsqvdlwkipnygsiathlapsvyppg
fgevlvffmskmpgpgaynlpcllpqeyishlaseqaptvgeaallhyvdpdtgrnlgef
kaypdgfltcvpngassgpqqlpingvfvfvswvsrfyqlkpv

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3by3B (B:)
pftlpnlplsslsnsraplpissmgispdnvqsvqfqngrctldgrlvgttpvslshvak
irgtsngtvinlteldgtpfhpfegpapigfpdlggcdwhinmtqfghssqtqydvdttp
dtfvphlgsiqangigsgnyvgvlswisppshpsgsqvdlwkipnygssiteathlapsv
yppgfgevlvffmskmpgpgaynlpcllpqeyishlaseqaptvgeaallhyvdpdtgrn
lgefkaypdgfltcvpngassgpqqlpingvfvfvswvsrfyqlkpvgtassargrlglr
r

    Sequence, based on observed residues (ATOM records):
    >3by3B (B:)
pftlpnlplsslsnsraplpissmgispdnvqsvqfqngrctldgrlvgttpvslshvak
irgtsngtvinlteldgtpfhpfegpapigfpdlggcdwhinmtqfghsqtqydvdttpd
tfvphlgsiqangigsgnyvgvlswisppshpgsqvdlwkipnygsiteathlapsvypp
gfgevlvffmskmpgpgaynlpcllpqeyishlaseqaptvgeaallhyvdpdtgrnlge
fkaypdgfltcvpngassgpqqlpingvfvfvswvsrfyqlkpv