PDB entry 3bso

View 3bso on RCSB PDB site
Description: Norwalk Virus polymerase bound to cytidine 5'-triphosphate and primer-template RNA
Class: Transferase/RNA
Keywords: RNA-dependent RNA polymerase, viral replication, antiviral enzyme inhibitor, Helicase, Hydrolase, Nucleotide-binding, Nucleotidyltransferase, RNA replication, RNA-directed RNA polymerase, Transferase, Transferase-RNA COMPLEX
Deposited on 2007-12-26, released 2008-01-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.74 Å
R-factor: 0.202
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA dependent RNA polymerase
    Species: Norwalk virus [TaxId:11983]
    Gene: polymerase
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bsoa_
  • Chain 'P':
    Compound: RNA (5'-r(*up*gp*cp*cp*cp*gp*gp*g)-3')
    Species: synthetic, synthetic
  • Chain 'T':
    Compound: RNA (5'-r(p*up*gp*cp*cp*cp*gp*gp*gp*c)-3')
    Species: synthetic, synthetic
  • Heterogens: GOL, MN, CTP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3bsoA (A:)
gsdskgtycgapilgpgsapklstktkfwrsstaplppgtyepaylggkdprvkggpslq
qvmrdqlkpfteprgkppkpsvleaakktiinvleqtidppdkwsfaqacasldkttssg
hphhmrkndcwngesftgkladqaskanlmfeegknmtpvytgalkdelvktdkiygkik
krllwgsdlatmircarafgglmdelkthcvtlpirvgmnmnedgpiiferhsryryhyd
adysrwdstqqravlaaaleimvkfssephlaqvvaedllspsvvdvgdftisineglps
gvpctsqwnsiahwlltlcalsevtnlspdiiqanslfsfygddeivstdikldpeklta
klkeyglkptrpdktegplvisedlngltflrrtvtrdpagwfgkleqssilrqmywtrg
pnhedpsetmiphsqrpiqlmsllgeaalhgpafyskisklviaelkeggmdfyvprqep
mfrwmrfsdlstwegdrnlapsfvnedgve

    Sequence, based on observed residues (ATOM records): (download) 
    >3bsoA (A:)
kgtycgapilgpgsapklstktkfwrsstaplppgtyepaylggkdprvkggpslqqvmr
dqlkpfteprgkppkpsvleaakktiinvleqtidppdkwsfaqacasldkttssghphh
mrkndcwngesftgkladqaskanlmfeegknmtpvytgalkdelvktdkiygkikkrll
wgsdlatmircarafgglmdelkthcvtlpirvgmnmnedgpiiferhsryryhydadys
rwdstqqravlaaaleimvkfssephlaqvvaedllspsvvdvgdftisineglpsgvpc
tsqwnsiahwlltlcalsevtnlspdiiqanslfsfygddeivstdikldpekltaklke
yglkptrpdktegplvisedlngltflrrtvtrdpagwfgkleqssilrqmywtrgpnhe
dpsetmiphsqrpiqlmsllgeaalhgpafyskisklviaeldfyvprqepmfrwmrfs

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.