PDB entry 3bml

View 3bml on RCSB PDB site
Description: Structure of Pteridine Reductase 1 (PTR1) from Trypanosoma brucei in ternary complex with cofactor (NADP+) and inhibitor (Compound AX1)
Class: Oxidoreductase
Keywords: pteridine reductase, ptr1, trypanosoma brucei, short chain dehydrogenase, inhibitor, Oxidoreductase
Deposited on 2007-12-13, released 2008-12-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2010-01-19, with a file datestamp of 2010-01-15.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.253
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: pteridine reductase
    Species: Trypanosoma brucei brucei [TaxId:5702]
    Gene: PTR1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bmla_
  • Chain 'B':
    Compound: pteridine reductase
    Species: Trypanosoma brucei brucei [TaxId:5702]
    Gene: PTR1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bmlb_
  • Chain 'C':
    Compound: pteridine reductase
    Species: Trypanosoma brucei brucei [TaxId:5702]
    Gene: PTR1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bmlc_
  • Chain 'D':
    Compound: pteridine reductase
    Species: Trypanosoma brucei brucei [TaxId:5702]
    Gene: PTR1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bmld_
  • Heterogens: NAP, AX1, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3bmlA (A:)
mgsshhhhhhssglvprgshmeapaavvtgaakrigraiavklhqtgyrvvihyhnsaea
avsladelnkersntavvcqadltnsnvlpasceeiinscfrafgrcdvlvnnasafypt
plvqgdhednsngktvetqvaeligtnaiapflltmsfaqrqkgtnpnctssnlsivnlc
damvdqpcmafslynmgkhalvgltqsaalelapygirvngvapgvsllpvamgeeekdk
wrrkvplgrreasaeqiadaviflvsgsaqyitgsiikvdgglslvha

    Sequence, based on observed residues (ATOM records): (download) 
    >3bmlA (A:)
eapaavvtgaakrigraiavklhqtgyrvvihyhnsaeaavsladelnkersntavvcqa
dltnsnvlpasceeiinscfrafgrcdvlvnnasafyptplvgktvetqvaeligtnaia
pflltmsfaqrqsnlsivnlcdamvdqpcmafslynmgkhalvgltqsaalelapygirv
ngvapgvsllpvamgeeekdkwrrkvplgrreasaeqiadaviflvsgsaqyitgsiikv
dgglslvha

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3bmlB (B:)
mgsshhhhhhssglvprgshmeapaavvtgaakrigraiavklhqtgyrvvihyhnsaea
avsladelnkersntavvcqadltnsnvlpasceeiinscfrafgrcdvlvnnasafypt
plvqgdhednsngktvetqvaeligtnaiapflltmsfaqrqkgtnpnctssnlsivnlc
damvdqpcmafslynmgkhalvgltqsaalelapygirvngvapgvsllpvamgeeekdk
wrrkvplgrreasaeqiadaviflvsgsaqyitgsiikvdgglslvha

    Sequence, based on observed residues (ATOM records): (download) 
    >3bmlB (B:)
eapaavvtgaakrigraiavklhqtgyrvvihyhnsaeaavsladelnkersntavvcqa
dltnsnvlpasceeiinscfrafgrcdvlvnnasafyptplvgktvetqvaeligtnaia
pflltmsfaqrqnlsivnlcdamvdqpcmafslynmgkhalvgltqsaalelapygirvn
gvapgvsllpvamgeeekdkwrrkvplgrreasaeqiadaviflvsgsaqyitgsiikvd
gglslvha

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3bmlC (C:)
mgsshhhhhhssglvprgshmeapaavvtgaakrigraiavklhqtgyrvvihyhnsaea
avsladelnkersntavvcqadltnsnvlpasceeiinscfrafgrcdvlvnnasafypt
plvqgdhednsngktvetqvaeligtnaiapflltmsfaqrqkgtnpnctssnlsivnlc
damvdqpcmafslynmgkhalvgltqsaalelapygirvngvapgvsllpvamgeeekdk
wrrkvplgrreasaeqiadaviflvsgsaqyitgsiikvdgglslvha

    Sequence, based on observed residues (ATOM records): (download) 
    >3bmlC (C:)
eapaavvtgaakrigraiavklhqtgyrvvihyhnsaeaavsladelnkersntavvcqa
dltnsnvlpasceeiinscfrafgrcdvlvnnasafyptplvgktvetqvaeligtnaia
pflltmsfaqrqsnlsivnlcdamvdqpcmafslynmgkhalvgltqsaalelapygirv
ngvapgvsllpvamgeeekdkwrrkvplgrreasaeqiadaviflvsgsaqyitgsiikv
dgglslvha

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3bmlD (D:)
mgsshhhhhhssglvprgshmeapaavvtgaakrigraiavklhqtgyrvvihyhnsaea
avsladelnkersntavvcqadltnsnvlpasceeiinscfrafgrcdvlvnnasafypt
plvqgdhednsngktvetqvaeligtnaiapflltmsfaqrqkgtnpnctssnlsivnlc
damvdqpcmafslynmgkhalvgltqsaalelapygirvngvapgvsllpvamgeeekdk
wrrkvplgrreasaeqiadaviflvsgsaqyitgsiikvdgglslvha

    Sequence, based on observed residues (ATOM records): (download) 
    >3bmlD (D:)
eapaavvtgaakrigraiavklhqtgyrvvihyhnsaeaavsladelnkersntavvcqa
dltnsnvlpasceeiinscfrafgrcdvlvnnasafyptplvgktvetqvaeligtnaia
pflltmsfaqrqsnlsivnlcdamvdqpcmafslynmgkhalvgltqsaalelapygirv
ngvapgvsllpvamgeeekdkwrrkvplgrreasaeqiadaviflvsgsaqyitgsiikv
dgglslvha