PDB entry 3bma

View 3bma on RCSB PDB site
Description: crystal structure of d-alanyl-lipoteichoic acid synthetase from streptococcus pneumoniae r6
Deposited on 2007-12-12, released 2007-12-25
The last revision was dated 2021-10-20, with a file datestamp of 2021-10-15.
Experiment type: XRAY
Resolution: 2.24 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: D-alanyl-lipoteichoic acid synthetase
    Species: Streptococcus pneumoniae [TaxId:171101]
    Gene: dltD, spr1979
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DN13 (3-398)
      • expression tag (0-2)
      • engineered mutation (188)
      • expression tag (399-406)
  • Chain 'B':
    Compound: D-alanyl-lipoteichoic acid synthetase
    Species: Streptococcus pneumoniae [TaxId:171101]
    Gene: dltD, spr1979
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DN13 (3-398)
      • expression tag (0-2)
      • engineered mutation (188)
      • expression tag (399-406)
  • Chain 'C':
    Compound: D-alanyl-lipoteichoic acid synthetase
    Species: Streptococcus pneumoniae [TaxId:171101]
    Gene: dltD, spr1979
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DN13 (3-398)
      • expression tag (0-2)
      • engineered mutation (188)
      • expression tag (399-406)
  • Chain 'D':
    Compound: D-alanyl-lipoteichoic acid synthetase
    Species: Streptococcus pneumoniae [TaxId:171101]
    Gene: dltD, spr1979
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DN13 (3-398)
      • expression tag (0-2)
      • engineered mutation (188)
      • expression tag (399-406)
  • Chain 'E':
    Compound: D-alanyl-lipoteichoic acid synthetase
    Species: Streptococcus pneumoniae [TaxId:171101]
    Gene: dltD, spr1979
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DN13 (3-398)
      • expression tag (0-2)
      • engineered mutation (188)
      • expression tag (399-406)
  • Chain 'F':
    Compound: D-alanyl-lipoteichoic acid synthetase
    Species: Streptococcus pneumoniae [TaxId:171101]
    Gene: dltD, spr1979
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DN13 (3-398)
      • expression tag (0-2)
      • engineered mutation (188)
      • expression tag (399-406)
  • Heterogens: SO4, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3bmaA (A:)
mslptemhhnlgaekrsavattidsfkersqkvralsdpnvrfvpffgssewlrfdgahp
avlaekynrsyrpyllgqggaaslnqyfgmqqmlpqlenkqvvyvispqwfskngydpaa
fqqyfngdqltsflkhqsgdqasqyaatrllqqfpnvamkdlvqklaskeelstadnemi
ellarfnerqasffgqfsvrgyvnydkhvakylkilpdqfsyqaiedvvkadaekntsnn
emgmenyfyneqikkdlkklkdsqksftylkspeyndlqlvltqfskskvnpifiippvn
kkwmdyaglredmyqqtvqkiryqlesqgftniadfskdggepffmkdtihlgwlgwlaf
dkavdpflsnptpaptyhlnerffskdwatydgdvkefqeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3bmaA (A:)
mhhnlgaekrsavattidsfkersqkvralsdpnvrfvpffgssewlrfdgahpavlaek
ynrsyrpyllgqggaaslnqyfgmqqmlpqlenkqvvyvispqwfskngydpaafqqyfn
gdqltsflkhqsgdqasqyaatrllqqfpnvamkdlvqklaskeelstadnemiellarf
nerqasffgqfsvrgyvnydkhvakylkilpdqfsyqaiedvvkadaekntsnnemgmen
yfyneqikkdlkklkdsqksftylkspeyndlqlvltqfskskvnpifiippvnkkwmdy
aglredmyqqtvqkiryqlesqgftniadfskdggepffmkdtihlgwlgwlafdkavdp
flsnptpaptyhlnerffskdwatydgdvkef

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3bmaB (B:)
mslptemhhnlgaekrsavattidsfkersqkvralsdpnvrfvpffgssewlrfdgahp
avlaekynrsyrpyllgqggaaslnqyfgmqqmlpqlenkqvvyvispqwfskngydpaa
fqqyfngdqltsflkhqsgdqasqyaatrllqqfpnvamkdlvqklaskeelstadnemi
ellarfnerqasffgqfsvrgyvnydkhvakylkilpdqfsyqaiedvvkadaekntsnn
emgmenyfyneqikkdlkklkdsqksftylkspeyndlqlvltqfskskvnpifiippvn
kkwmdyaglredmyqqtvqkiryqlesqgftniadfskdggepffmkdtihlgwlgwlaf
dkavdpflsnptpaptyhlnerffskdwatydgdvkefqeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3bmaB (B:)
mhhnlgaekrsavattidsfkersqkvralsdpnvrfvpffgssewlrfdgahpavlaek
ynrsyrpyllgqggaaslnqyfgmqqmlpqlenkqvvyvispqwfskngydpaafqqyfn
gdqltsflkhqsgdqasqyaatrllqqfpnvamkdlvqklaskeelstadnemiellarf
nerqasffgqfsvrgyvnydkhvakylkilpdqfsyqaiedvvkadaekntsnnemgmen
yfyneqikkdlkklkdsqksftylkspeyndlqlvltqfskskvnpifiippvnkkwmdy
aglredmyqqtvqkiryqlesqgftniadfskdggepffmkdtihlgwlgwlafdkavdp
flsnptpaptyhlnerffskdwatydgdvkefq

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3bmaC (C:)
mslptemhhnlgaekrsavattidsfkersqkvralsdpnvrfvpffgssewlrfdgahp
avlaekynrsyrpyllgqggaaslnqyfgmqqmlpqlenkqvvyvispqwfskngydpaa
fqqyfngdqltsflkhqsgdqasqyaatrllqqfpnvamkdlvqklaskeelstadnemi
ellarfnerqasffgqfsvrgyvnydkhvakylkilpdqfsyqaiedvvkadaekntsnn
emgmenyfyneqikkdlkklkdsqksftylkspeyndlqlvltqfskskvnpifiippvn
kkwmdyaglredmyqqtvqkiryqlesqgftniadfskdggepffmkdtihlgwlgwlaf
dkavdpflsnptpaptyhlnerffskdwatydgdvkefqeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3bmaC (C:)
mhhnlgaekrsavattidsfkersqkvralsdpnvrfvpffgssewlrfdgahpavlaek
ynrsyrpyllgqggaaslnqyfgmqqmlpqlenkqvvyvispqwfskngydpaafqqyfn
gdqltsflkhqsgdqasqyaatrllqqfpnvamkdlvqklaskeelstadnemiellarf
nerqasffgqfsvrgyvnydkhvakylkilpdqfsyqaiedvvkadaekntsnnemgmen
yfyneqikkdlkklkdsqksftylkspeyndlqlvltqfskskvnpifiippvnkkwmdy
aglredmyqqtvqkiryqlesqgftniadfskdggepffmkdtihlgwlgwlafdkavdp
flsnptpaptyhlnerffskdwatydgdvkefqe

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3bmaD (D:)
mslptemhhnlgaekrsavattidsfkersqkvralsdpnvrfvpffgssewlrfdgahp
avlaekynrsyrpyllgqggaaslnqyfgmqqmlpqlenkqvvyvispqwfskngydpaa
fqqyfngdqltsflkhqsgdqasqyaatrllqqfpnvamkdlvqklaskeelstadnemi
ellarfnerqasffgqfsvrgyvnydkhvakylkilpdqfsyqaiedvvkadaekntsnn
emgmenyfyneqikkdlkklkdsqksftylkspeyndlqlvltqfskskvnpifiippvn
kkwmdyaglredmyqqtvqkiryqlesqgftniadfskdggepffmkdtihlgwlgwlaf
dkavdpflsnptpaptyhlnerffskdwatydgdvkefqeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3bmaD (D:)
mhhnlgaekrsavattidsfkersqkvralsdpnvrfvpffgssewlrfdgahpavlaek
ynrsyrpyllgqggaaslnqyfgmqqmlpqlenkqvvyvispqwfskngydpaafqqyfn
gdqltsflkhqsgdqasqyaatrllqqfpnvamkdlvqklaskeelstadnemiellarf
nerqasffgqfgyvnydkhvakylkilpdqfsyqaiedvvkadaekntsnnemgmenyfy
neqikkdlkklkdsqksftylkspeyndlqlvltqfskskvnpifiippvnkkwmdyagl
redmyqqtvqkiryqlesqgftniadfskdggepffmkdtihlgwlgwlafdkavdpfls
nptpaptyhlnerffskdwatydgdvkef

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3bmaE (E:)
mslptemhhnlgaekrsavattidsfkersqkvralsdpnvrfvpffgssewlrfdgahp
avlaekynrsyrpyllgqggaaslnqyfgmqqmlpqlenkqvvyvispqwfskngydpaa
fqqyfngdqltsflkhqsgdqasqyaatrllqqfpnvamkdlvqklaskeelstadnemi
ellarfnerqasffgqfsvrgyvnydkhvakylkilpdqfsyqaiedvvkadaekntsnn
emgmenyfyneqikkdlkklkdsqksftylkspeyndlqlvltqfskskvnpifiippvn
kkwmdyaglredmyqqtvqkiryqlesqgftniadfskdggepffmkdtihlgwlgwlaf
dkavdpflsnptpaptyhlnerffskdwatydgdvkefqeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3bmaE (E:)
mhhnlgaekrsavattidsfkersqkvralsdpnvrfvpffgssewlrfdgahpavlaek
ynrsyrpyllgqggaaslnqyfgmqqmlpqlenkqvvyvispqwfskngydpaafqqyfn
gdqltsflkhqsgdqasqyaatrllqqfpnvamkdlvqklaskeelstadnemiellarf
nerqasffgqfsrgyvnydkhvakylkilpdqfsyqaiedvvkadaekntsnnemgmeny
fyneqikkdlkklkdsqksftylkspeyndlqlvltqfskskvnpifiippvnkkwmdya
glredmyqqtvqkiryqlesqgftniadfskdggepffmkdtihlgwlgwlafdkavdpf
lsnptpaptyhlnerffskdwatydgdvke

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3bmaF (F:)
mslptemhhnlgaekrsavattidsfkersqkvralsdpnvrfvpffgssewlrfdgahp
avlaekynrsyrpyllgqggaaslnqyfgmqqmlpqlenkqvvyvispqwfskngydpaa
fqqyfngdqltsflkhqsgdqasqyaatrllqqfpnvamkdlvqklaskeelstadnemi
ellarfnerqasffgqfsvrgyvnydkhvakylkilpdqfsyqaiedvvkadaekntsnn
emgmenyfyneqikkdlkklkdsqksftylkspeyndlqlvltqfskskvnpifiippvn
kkwmdyaglredmyqqtvqkiryqlesqgftniadfskdggepffmkdtihlgwlgwlaf
dkavdpflsnptpaptyhlnerffskdwatydgdvkefqeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3bmaF (F:)
mhhnlgaekrsavattidsfkersqkvralsdpnvrfvpffgssewlrfdgahpavlaek
ynrsyrpyllgqggaaslnqyfgmqqmlpqlenkqvvyvispqwfskngydpaafqqyfn
gdqltsflkhqsgdqasqyaatrllqqfpnvamkdlvqklaskeelstadnemiellarf
nerqasffgqfsgyvnydkhvakylkilpdqfsyqaiedvvkadaekntsnnemgmenyf
yneqikkdlkklkdsqksftylkspeyndlqlvltqfskskvnpifiippvnkkwmdyag
lredmyqqtvqkiryqlesqgftniadfskdggepffmkdtihlgwlgwlafdkavdpfl
snptpaptyhlnerffskdwatydgdv