PDB entry 3blv

View 3blv on RCSB PDB site
Description: Yeast Isocitrate Dehydrogenase with Citrate Bound in the Regulatory Subunits
Deposited on 2007-12-11, released 2008-02-05
The last revision was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: 0.224
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Isocitrate dehydrogenase [NAD] subunit 1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: IDH1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Isocitrate dehydrogenase [NAD] subunit 2
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: IDH2
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Isocitrate dehydrogenase [NAD] subunit 1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: IDH1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Isocitrate dehydrogenase [NAD] subunit 2
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: IDH2
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Isocitrate dehydrogenase [NAD] subunit 1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: IDH1
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Isocitrate dehydrogenase [NAD] subunit 2
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: IDH2
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Isocitrate dehydrogenase [NAD] subunit 1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: IDH1
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Isocitrate dehydrogenase [NAD] subunit 2
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: IDH2
    Database cross-references and differences (RAF-indexed):
  • Heterogens: FLC

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3blvA (A:)
ataaqaertlpkkyggrftvtlipgdgvgkeitdsvrtifeaenipidwetinikqtdhk
egvyeaveslkrnkiglkglwhtpadqtghgslnvalrkqldiyanvalfkslkgvktri
pdidlivirentegefsglehesvpgvveslkvmtrpkteriarfafdfakkynrksvta
vhkanimklgdglfrniiteigqkeypdidvssiivdnasmqavakphqfdvlvtpsmyg
tilgnigaaliggpglvaganfgrdyavfepgsrhvgldikgqnvanptamilsstlmln
hlglneyatriskavhetiaegkhttrdiggsssttdftneiinklstmhhhhh

    Sequence, based on observed residues (ATOM records):
    >3blvA (A:)
yggrftvtlipgdgvgkeitdsvrtifeaenipidwetinikegvyeaveslkrnkiglk
glwhtpadqtghgslnvalrkqldiyanvalfkslkgvktripdidlivirentegefsg
lehesvpgvveslkvmtrpkteriarfafdfakkynrksvtavhkanimklgdglfrnii
teigqkeypdidvssiivdnasmqavakphqfdvlvtpsmygtilgnigaaliggpglva
ganfgrdyavfepgsrhvgldikgqnvanptamilsstlmlnhlglneyatriskavhet
iaegkhttrdiggsssttdftneiinklstm

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3blvB (B:)
atvkqpsigrytgkpnpstgkytvsfiegdgigpeisksvkkifsaanvpiewescdvsp
ifvnglttipdpavqsitknlvalkgplatpigkghrslnltlrktfglfanvrpaksie
gfkttyenvdlvlirentegeysgiehivcpgvvqsiklitrdaserviryafeyaraig
rprvivvhkstiqrladglfvnvakelskeypdltletelidnsvlkvvtnpsaytdavs
vcpnlygdilsdlnsglsagslgltpsanighkisifeavhgsapdiagqdkanptalll
ssvmmlnhmgltnhadqiqnavlstiasgpenrtgdlagtattssfteavikrl

    Sequence, based on observed residues (ATOM records):
    >3blvB (B:)
kqpsigrytgkpnpstgkytvsfiegdgigpeisksvkkifsaanvpiewescdvspifv
nglttipdpavqsitknlvalkgplatrslnltlrktfglfanvrpaksiegfkttyenv
dlvlirentegeysgiehivcpgvvqsiklitrdaserviryafeyaraigrprvivvhk
stiqrladglfvnvakelskeypdltletelidnsvlkvvtnpsaytdavsvcpnlygdi
lsdlnsglsagslgltpsanighkisifeavhgsapdiagqdkanptalllssvmmlnhm
gltnhadqiqnavlstiasgpenrtgdlagtattssfteavikrl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3blvC (C:)
ataaqaertlpkkyggrftvtlipgdgvgkeitdsvrtifeaenipidwetinikqtdhk
egvyeaveslkrnkiglkglwhtpadqtghgslnvalrkqldiyanvalfkslkgvktri
pdidlivirentegefsglehesvpgvveslkvmtrpkteriarfafdfakkynrksvta
vhkanimklgdglfrniiteigqkeypdidvssiivdnasmqavakphqfdvlvtpsmyg
tilgnigaaliggpglvaganfgrdyavfepgsrhvgldikgqnvanptamilsstlmln
hlglneyatriskavhetiaegkhttrdiggsssttdftneiinklstmhhhhh

    Sequence, based on observed residues (ATOM records):
    >3blvC (C:)
ataaqaertlpkkyggrftvtlipgdgvgkeitdsvrtifeaenipidwetinikegvye
aveslkrnkiglkglwhtpadqtghgslnvalrkqldiyanvalfkslkgvktripdidl
ivirentegefsglehesvpgvveslkvmtrpkteriarfafdfakkynrksvtavhkan
imklgdglfrniiteigqkeypdidvssiivdnasmqavakphqfdvlvtpsmygtilgn
igaaliggpglvaganfgrdyavfepgsrhvgldikgqnvanptamilsstlmlnhlgln
eyatriskavhetiaegkhttrdiggsssttdftneiinklstm

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3blvD (D:)
atvkqpsigrytgkpnpstgkytvsfiegdgigpeisksvkkifsaanvpiewescdvsp
ifvnglttipdpavqsitknlvalkgplatpigkghrslnltlrktfglfanvrpaksie
gfkttyenvdlvlirentegeysgiehivcpgvvqsiklitrdaserviryafeyaraig
rprvivvhkstiqrladglfvnvakelskeypdltletelidnsvlkvvtnpsaytdavs
vcpnlygdilsdlnsglsagslgltpsanighkisifeavhgsapdiagqdkanptalll
ssvmmlnhmgltnhadqiqnavlstiasgpenrtgdlagtattssfteavikrl

    Sequence, based on observed residues (ATOM records):
    >3blvD (D:)
kqpsigrytgkpnpstgkytvsfiegdgigpeisksvkkifsaanvpiewescdvspifv
nglttipdpavqsitknlvalkgplatphrslnltlrktfglfanvrpaksiegfkttye
nvdlvlirentegeysgiehivcpgvvqsiklitrdaserviryafeyaraigrprvivv
hkstiqrladglfvnvakelskeypdltletelidnsvlkvvtnpsaytdavsvcpnlyg
dilsdlnsglsagslgltpsanighkisifeavhgsapdiagqdkanptalllssvmmln
hmgltnhadqiqnavlstiasgpenrtgdlagtattssfteavikrl

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3blvE (E:)
ataaqaertlpkkyggrftvtlipgdgvgkeitdsvrtifeaenipidwetinikqtdhk
egvyeaveslkrnkiglkglwhtpadqtghgslnvalrkqldiyanvalfkslkgvktri
pdidlivirentegefsglehesvpgvveslkvmtrpkteriarfafdfakkynrksvta
vhkanimklgdglfrniiteigqkeypdidvssiivdnasmqavakphqfdvlvtpsmyg
tilgnigaaliggpglvaganfgrdyavfepgsrhvgldikgqnvanptamilsstlmln
hlglneyatriskavhetiaegkhttrdiggsssttdftneiinklstmhhhhh

    Sequence, based on observed residues (ATOM records):
    >3blvE (E:)
ataaqaertlpkkyggrftvtlipgdgvgkeitdsvrtifeaenipidwetinikegvye
aveslkrnkiglkglwhtpadqtghgslnvalrkqldiyanvalfkslkgvktripdidl
ivirentegefsglehesvpgvveslkvmtrpkteriarfafdfakkynrksvtavhkan
imklgdglfrniiteigqkeypdidvssiivdnasmqavakphqfdvlvtpsmygtilgn
igaaliggpglvaganfgrdyavfepgsrhvgldikgqnvanptamilsstlmlnhlgln
eyatriskavhetiaegkhttrdiggsssttdftneiinklstm

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3blvF (F:)
atvkqpsigrytgkpnpstgkytvsfiegdgigpeisksvkkifsaanvpiewescdvsp
ifvnglttipdpavqsitknlvalkgplatpigkghrslnltlrktfglfanvrpaksie
gfkttyenvdlvlirentegeysgiehivcpgvvqsiklitrdaserviryafeyaraig
rprvivvhkstiqrladglfvnvakelskeypdltletelidnsvlkvvtnpsaytdavs
vcpnlygdilsdlnsglsagslgltpsanighkisifeavhgsapdiagqdkanptalll
ssvmmlnhmgltnhadqiqnavlstiasgpenrtgdlagtattssfteavikrl

    Sequence, based on observed residues (ATOM records):
    >3blvF (F:)
kqpsigrytgkpnpstgkytvsfiegdgigpeisksvkkifsaanvpiewescdvspifv
nglttipdpavqsitknlvalkgplatphrslnltlrktfglfanvrpaksiegfkttye
nvdlvlirentegeysgiehivcpgvvqsiklitrdaserviryafeyaraigrprvivv
hkstiqrladglfvnvakelskeypdltletelidnsvlkvvtnpsaytdavsvcpnlyg
dilsdlnsglsagslgltpsanighkisifeavhgsapdiagqdkanptalllssvmmln
hmgltnhadqiqnavlstiasgpenrtgdlagtattssfteavikrl

  • Chain 'G':
    Sequence, based on SEQRES records:
    >3blvG (G:)
ataaqaertlpkkyggrftvtlipgdgvgkeitdsvrtifeaenipidwetinikqtdhk
egvyeaveslkrnkiglkglwhtpadqtghgslnvalrkqldiyanvalfkslkgvktri
pdidlivirentegefsglehesvpgvveslkvmtrpkteriarfafdfakkynrksvta
vhkanimklgdglfrniiteigqkeypdidvssiivdnasmqavakphqfdvlvtpsmyg
tilgnigaaliggpglvaganfgrdyavfepgsrhvgldikgqnvanptamilsstlmln
hlglneyatriskavhetiaegkhttrdiggsssttdftneiinklstmhhhhh

    Sequence, based on observed residues (ATOM records):
    >3blvG (G:)
yggrftvtlipgdgvgkeitdsvrtifeaenipidwetinikegvyeaveslkrnkiglk
glwhtpadqtghgslnvalrkqldiyanvalfkslkgvktripdidlivirentegefsg
lehesvpgvveslkvmtrpkteriarfafdfakkynrksvtavhkanimklgdglfrnii
teigqkeypdidvssiivdnasmqavakphqfdvlvtpsmygtilgnigaaliggpglva
ganfgrdyavfepgsrhvgldikgqnvanptamilsstlmlnhlglneyatriskavhet
iaegkhttrdiggsssttdftneiinklstm

  • Chain 'H':
    Sequence, based on SEQRES records:
    >3blvH (H:)
atvkqpsigrytgkpnpstgkytvsfiegdgigpeisksvkkifsaanvpiewescdvsp
ifvnglttipdpavqsitknlvalkgplatpigkghrslnltlrktfglfanvrpaksie
gfkttyenvdlvlirentegeysgiehivcpgvvqsiklitrdaserviryafeyaraig
rprvivvhkstiqrladglfvnvakelskeypdltletelidnsvlkvvtnpsaytdavs
vcpnlygdilsdlnsglsagslgltpsanighkisifeavhgsapdiagqdkanptalll
ssvmmlnhmgltnhadqiqnavlstiasgpenrtgdlagtattssfteavikrl

    Sequence, based on observed residues (ATOM records):
    >3blvH (H:)
kqpsigrytgkpnpstgkytvsfiegdgigpeisksvkkifsaanvpiewescdvspifv
nglttipdpavqsitknlvalkgplatpigrslnltlrktfglfanvrpaksiegfktty
envdlvlirentegeysgiehivcpgvvqsiklitrdaserviryafeyaraigrprviv
vhkstiqrladglfvnvakelskeypdltletelidnsvlkvvtnpsaytdavsvcpnly
gdilsdlnsglsagslgltpsanighkisifeavhgsapdiagqdkanptalllssvmml
nhmgltnhadqiqnavlstiasgpenrtgdlagtattssfteavikrl