PDB entry 3blc

View 3blc on RCSB PDB site
Description: crystal structure of the periplasmic domain of the escherichia coli yidc
Deposited on 2007-12-10, released 2007-12-25
The last revision was dated 2021-10-20, with a file datestamp of 2021-10-15.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.213
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Inner membrane protein oxaA
    Species: Escherichia coli [TaxId:83333]
    Gene: oxaA, yidC
    Database cross-references and differences (RAF-indexed):
    • Uniprot P25714 (1-315)
      • expression tag (0)
      • engineered mutation (203-204)
      • engineered mutation (206-207)
      • engineered mutation (209)
      • expression tag (316-329)
  • Chain 'B':
    Compound: Inner membrane protein oxaA
    Species: Escherichia coli [TaxId:83333]
    Gene: oxaA, yidC
    Database cross-references and differences (RAF-indexed):
    • Uniprot P25714 (1-315)
      • expression tag (0)
      • engineered mutation (203-204)
      • engineered mutation (206-207)
      • engineered mutation (209)
      • expression tag (316-329)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3blcA (A:)
mdknpqpqaqqttqttttaagsaadqgvpasgqgklisvktdvldltintrggdveqall
paypkelnstqpfqlletspqfiyqaqsgltgrdgpdnpangprplynvekdayvlaegq
nelqvpmtytdaagntftktfvlkrgdyavnvnynvqnagekpleissfgqlkqsitlpp
hldtgssnfalhtfrgaaystpdaayaayafdtiadnenlnisskggwvamlqqyfataw
iphndgtnnfytanlgngiaaigyksqpvlvqpgqtgamnstlwvgpeiqdkmaavaphl
dltvdygwlwfisqpllvprgslehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3blcA (A:)
qgklisvktdvldltintrggdveqallpaypkelnstqpfqlletspqfiyqaqsgltg
rdgpdnpangprplynvekdayvlaegqnelqvpmtytdaagntftktfvlkrgdyavnv
nynvqnagekpleissfgqlkqsitlpphltfrgaaystpdaayaayafdtiadnenlni
sskggwvamlqqyfatawiphndgtnnfytanlgngiaaigyksqpvlvqpgqtgamnst
lwvgpeiqdkmaavaphldltvdygwlwfisqpllvprgs

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3blcB (B:)
mdknpqpqaqqttqttttaagsaadqgvpasgqgklisvktdvldltintrggdveqall
paypkelnstqpfqlletspqfiyqaqsgltgrdgpdnpangprplynvekdayvlaegq
nelqvpmtytdaagntftktfvlkrgdyavnvnynvqnagekpleissfgqlkqsitlpp
hldtgssnfalhtfrgaaystpdaayaayafdtiadnenlnisskggwvamlqqyfataw
iphndgtnnfytanlgngiaaigyksqpvlvqpgqtgamnstlwvgpeiqdkmaavaphl
dltvdygwlwfisqpllvprgslehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3blcB (B:)
gqgklisvktdvldltintrggdveqallpaypkelnstqpfqlletspqfiyqaqsglt
grdgpdnpangprplynvekdayvlaegqnelqvpmtytdaagntftktfvlkrgdyavn
vnynvqnagekpleissfgqlkqsitlpphltfrgaaystpdaayaayafdtiadnenln
isskggwvamlqqyfatawiphndgtnnfytanlgngiaaigyksqpvlvqpgqtgamns
tlwvgpeiqdkmaavaphldltvdygwlwfisqpllvp